Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1220 172 6e-38 seq2702 138 1e-27 seq7397 96.9 4e-15 >seq1220 Length=9499 Score = 172 bits (190), Expect = 6e-38 Identities = 180/234 (77%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420 || ||||| || | | ||||| |||||| |||| || |||||| ||||| |||||| Sbjct 266 TAGTTGCCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAG 207 Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480 || || || ||||| |||| || ||||||||||| ||||| |||| |||||||||||| Sbjct 206 TCCGACAGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCC 147 Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGA 46539 | ||| | || |||||||||| ||||||| ||||| ||| | | | || ||| || Sbjct 146 GGCGGAATGCCCTCCTTGTCCTGAATCTTCTGCTTGA-CGTTGTCGATCGAGTCCGACGG 88 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || | |||||| || |||||||||||||| || || ||||| ||||| Sbjct 87 CTCCACGTCGAGCGTGATCGTCTTGCCCGTCAGCGTCTTCACGAAGATCTGCAT 34 >seq2702 Length=56295 Score = 138 bits (152), Expect = 1e-27 Identities = 169/227 (74%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||| || || ||||| |||| || Sbjct 26974 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTC 26915 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| |||| ||||||||| || | || | | |||||||||| Sbjct 26914 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTG 26855 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCG-TGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 |||||||| ||||| | | | || | |||| | || || || | |||||| || | Sbjct 26854 GATCTTCTGCTTGA-CATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCT 26796 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCACAAACAACAC 46609 |||| ||||| || || || ||||| ||||| || || ||||||| Sbjct 26795 TGCCGGTCAGAGTCTTGACGAAGATCTGCATCTT-TACCTACAACAC 26750 >seq7397 Length=9624 Score = 96.9 bits (106), Expect = 4e-15 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| ||||| |||||||| || || ||||| |||| || Sbjct 4210 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 4269 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 |||||||||||||||||| |||| ||||||||| || Sbjct 4270 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATC 4305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565174867203840