Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3132 183 4e-41 seq4347 158 2e-33 >seq3132 Length=41768 Score = 183 bits (202), Expect = 4e-41 Identities = 937/1474 (64%), Gaps = 35/1474 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| | ||| | |||| ||||| |||| ||||| | | || ||||| ||| Sbjct 31717 CCGCAGCAGATGATTCTGCGTGTCGCCGTCGGCATCCACAAGCACGACATTGACGCTGCG 31776 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||||| | ||||| | | | |||| ||||| || || || || ||| Sbjct 31777 CTCGAGACGTACGAGTACATGTCGCAAAGCTTCTTCACGCACGCGACGCCGACGCTGTTC 31836 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| || || || | || || |||| || ||||| | || | ||||| || Sbjct 31837 AACGCGGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCCTGCTCGCCATGAAGGACGAC 31896 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || ||| | ||||| |||| ||| |||| | || || ||||| ||||||||||| Sbjct 31897 TCGATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCGTGCATCTCCAAGTGGGCTGGC 31956 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAA 111909 || ||||| | | | || | || | || | || |||||| | | || || | Sbjct 31957 GGCATCGGCGTCAGCGTGCACAACATCCGCGCGACGAA--CTCGTACATCCGCGGCACGA 32014 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | || || | || | | || ||||| ||||| || |||| ||| |||||||| | Sbjct 32015 ACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTCTTCAACGACACGGCGCGCTACG 32074 Query 111970 TAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 112026 | |||| | || | |||||||| || |||| | || || ||||| ||||||| Sbjct 32075 TCGACCAGGGCGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTACCTGGAGCCGTGGCACG 32134 Query 112027 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC- 112085 | || ||| | |||||||| || | ||||| || | ||| | | | | || Sbjct 32135 CCGACATCTTCGAGTTCCTGGACCTCAAGAAGAACCACGGCAACGAGCTG-CACCGCGCG 32193 Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145 || |||||||||| ||| | ||||| || ||||||||||||||| | || |||| | Sbjct 32194 CGTGATCTCTTCTACGCGATGTGGATCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAAC 32253 Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT-GGGTGA 112204 ||| | ||| || || || || || |||| || || |||| | | | ||| ||| || Sbjct 32254 GGCGAGTGGAGCCTGTTCTGCCCGAACGAGGCGCCGGGGCTCTAC-ACGACGTGGGGCGA 32312 Query 112205 GGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCC 112264 ||||| || || || ||| |||||||| || | || ||| |||| | | Sbjct 32313 CGAGTTCGAGGCGCTGTACCACCAGTACGAGCGCGAGGGCCGCGCGCGCAAGACGATCCG 32372 Query 112265 AGCTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATA 112323 || || | | | ||| || || ||| |||| || | |||||| || || || || | Sbjct 32373 CGC-GCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATCGAGACGGGCACGCCGTACA 32431 Query 112324 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT---CA 112380 |||| ||||| ||| | || |||| ||| || || |||| | || ||| | Sbjct 32432 TGCTGTACAAGGACTCGTGCAACCGCAAGTCGAACCAGCAGAACCTCGGCACGATCCGCT 32491 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 ||| ||||||||| || | | || | || |||||| || |||| Sbjct 32492 CGAG---CAACCTCTGCTGCGAGGTGCTCGAGTACACGTCGCCCGATGAGGTCGCGGTGT 32548 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 112500 | |||||||| || ||||| || |||||| |||| || ||| ||||| ||||| | Sbjct 32549 GCAACCTCGCGTCCATCGCGCTGTCCAAGTTTGTG--ACCGACGAC-AAGACCTTTGACT 32605 Query 112501 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560 | || ||| |||| | || || ||||| ||||| |||| || || || | Sbjct 32606 TCAAGAAGCTCTACGACATCACCAAGGTCGTCACGCGCAACCTGAACAAGGTCATCGACA 32665 Query 112561 GAAATTTTTACCC---CGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 || | ||||| | ||| | | || | || || | ||||| || || | Sbjct 32666 TCAACTACTACCCGATCCCCGAGGCCGAGCGCA---GCAACCTGCGCCACCGCCCGATCG 32722 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 112677 | |||| || || ||||||||||| | ||||| || || |||| || || || Sbjct 32723 GCATCGGCGTGCAGGGTCTCGCGGACGCGTTCATCCTCATGGGCTACGCGTTCGAGAGCG 32782 Query 112678 ACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGG 112737 |||| || || |||| | || || ||||| |||| | |||| | |||| Sbjct 32783 ACGAGGCCCGCGAGCTCAACAAGAACATCTTCGAGACGCTGTACTTTGGCGCTATGGAGG 32842 Query 112738 CGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 112797 | |||| | ||| || | || || || | | || |||||||| || | | Sbjct 32843 CCTCGATGGAGCTCGCACGGGAGCACGGCCCGTACGGCAGCTACGAGGGTTCGCCCG-TG 32901 Query 112798 CACAAGGGGTGCTT-CAATTTGATATGTGGGAAGGTGA----GACCAAGCTTCACTACGA 112852 |||||| ||| || || || ||||||| || | ||| | || || || Sbjct 32902 AGCAAGGGCATCTTCCAGTTCGACATGTGGG-GCGTCACGCCGACGTCGGGTCTCTGGGA 32960 Query 112853 CTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 112912 ||||| ||| ||||||| || || | || | || | || ||| || || | || Sbjct 32961 CTGGGCCGCGCTCAAGGCGAGCGTCGCGCAGTACGGCGTGCGCAACTCGCTGCTGCTCGC 33020 Query 112913 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 112972 || ||||| || || || ||||| || ||| | || || || || | | || || | Sbjct 33021 GCCGATGCCGACGGCGTCGACCGCGCAGATCCTCGGCAACAACGAGTCGATCGAGCCGTT 33080 Query 112973 CACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCA 113032 |||||| ||||| || | | ||||| || ||||| ||| || |||||| | Sbjct 33081 CACGACCAACATGTACAACCGCCGCGTGCTCGCTGGCGAGTTCACGATCGTGAACAAGTA 33140 Query 113033 TCTCGTGGATGACCTCAAAGAGATTGGTCTCTGG 113066 ||| || | || |||| ||| | || ||||| Sbjct 33141 CCTCATGAAGGAGCTCATCGAGCTCGGCATCTGG 33174 >seq4347 Length=93765 Score = 158 bits (174), Expect = 2e-33 Identities = 201/274 (73%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 102107 ||||| |||| ||| || ||||| | |||||||| || ||| | |||||| | Sbjct 73007 CTCATTGACACGTACATCAAGGACCAGACGGAGAAGAACCACCTCCTCCGCGCCATCGAG 72948 Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCG 102167 || ||||||| | || ||||| ||| | ||||| | ||||||| || | | || Sbjct 72947 ACCATTCCATGCGTGCAGAAGAAGGCGCACTGGGCGCTCAAGTGGTGCGACTCGC-GCCG 72889 Query 102168 CGTTCCTTT-GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 || |||| |||||||| | |||| || || |||||||| || |||||||| || Sbjct 72888 CGCGGCTTTTGCTGAGCGCATTGTCGCGTTCGCTGCCGTTGAGGGCATTTTCTTCTCGGG 72829 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 || |||||| | || | |||||||||||||| ||||||||||| || ||| ||||||| Sbjct 72828 CTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCCTCAGCTTCTC 72769 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| ||||| || || ||||| |||||| Sbjct 72768 GAACGAGCTCATCTCGCGCGATGAGGGCCTCCAC 72735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620672628554240