Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1220 120 2e-22 seq2702 93.3 3e-14 >seq1220 Length=9499 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 48536 GTCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATC 48595 || ||| || | || |||| ||||| || ||||| ||| || || || ||||| || Sbjct 264 GTTGCCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 205 Query 48596 AGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGT 48655 || || | || |||| |||| |||||| || || || ||||| ||||| || |||| Sbjct 204 CGACAGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGG 145 Query 48656 GGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTC 48715 |||| |||||||||||| |||||| || || || | | || || |||| ||| Sbjct 144 CGGAATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATCGAGTCCGACGGCTC 85 Query 48716 CACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || | ||| ||||| || ||||||| || || || || |||||||| Sbjct 84 CACGTCGAGCGTGATCGTCTTGCCCGTCAGCGTCTTCACGAAGATCTGCAT 34 >seq2702 Length=56295 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || ||||| ||| || || || ||||| || || || | || Sbjct 26982 AGGCGGAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGG 26923 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| ||||| || ||||| ||||| ||||||| || | |||||| Sbjct 26922 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCC 26863 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || ||| | | || || | ||| || || | ||| Sbjct 26862 TTGTCCTGGATCTTCTGCTTGACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTG 26803 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||||| || || |||| ||| || || || ||||||||| Sbjct 26802 ATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATC 26764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380895853048416