Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4347 179 7e-40 seq3132 168 1e-36 >seq4347 Length=93765 Score = 179 bits (198), Expect = 7e-40 Identities = 388/570 (68%), Gaps = 18/570 (3%) Strand=Plus/Minus Query 25480 TGGGAGATGTACAAGAAGGCTCAA---AACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 ||| |||||||||||||||| | | || |||||||||||| ||||| ||||| Sbjct 73271 TGGCAGATGTACAAGAAGGCCGAGGCGAGCTT---CTGGACCGCCGAGGAGATCGATCTC 73215 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | | ||| | | | |||| | || | | |||||| || ||| ||||| || Sbjct 73214 GTGCACGACCTCAAGGACTGGGGCAACCTCACGGACAACGAGCGCCACTTTATCAAGCAC 73155 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA-GAGATT 25655 || | || ||||| || || || ||||| || |||||||| || |||| || || Sbjct 73154 GTCCTCGCGTTCTTCGCGGCGAGCGACGGTATCGTCAACGAGAACCTC-GCGATGAACTT 73096 Query 25656 CACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCG 25714 || ||| || |||||| | | || |||| || ||||| || |||||||| ||||| | Sbjct 73095 CAGCAGCGAGGTGCAGGTTCCTG-AGGCGCGTTGCTTCTATGGCTTCCAGATCGCCATTG 73037 Query 25715 AAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTCG 25771 | || | ||||| |||||||| | ||| || || |||||||| | ||| Sbjct 73036 AGAACATCCACTCGGAGGTGTACTC---GCTGCTCATTGACACGTACATCAAGGACCAGA 72980 Query 25772 CCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGC 25831 | |||| | | || | | ||||||||| ||| || || | ||| |||||||| Sbjct 72979 CGGAGAAGAACCACCTCCTCCGCGCCATCGAGACCATTCCATGCGTGCAGAAGAAGGCGC 72920 Query 25832 GGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCT 25891 ||||| | |||||| | || | |||| | |||| ||||| | || || | Sbjct 72919 ACTGGGCGCTCAAGTGGTGCGACTCGCGCCGCGCGGCTTTTGCTGAGCGCATTGTCGCGT 72860 Query 25892 TTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCTCAAG 25950 | ||||| || |||||||| || ||| || ||||| ||| ||||||||||||||||| Sbjct 72859 TCGCTGCCGTTGAGGGCATTTTCTTCTCGGGCTCGTTCTGCT-CCATCTTCTGGCTCAAG 72801 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || || |||||| || || ||| || |||||||||||| | || ||||| Sbjct 72800 AAGCGTGGTCTCATGCCTGGCCTCAGCTTCTCGAACGAGCTCATCTCGCGCGATGAGGGC 72741 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 |||||| | || || || |||||||| ||| Sbjct 72740 CTCCACTGCGACTTCGCTTGCCTGCTGTAC 72711 >seq3132 Length=41768 Score = 168 bits (186), Expect = 1e-36 Identities = 585/894 (65%), Gaps = 29/894 (3%) Strand=Plus/Minus Query 221768 CAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG 221827 ||||||||||| | ||| || || |||| | || || |||||||| ||| | | Sbjct 32504 CAGAGGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCACGAG 32445 Query 221828 TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAG 221887 |||||||| ||||| | || ||| ||||| | ||| | | | || ||| | |||| Sbjct 32444 TCCTTGTACAGCATGTACGGCGTGCCCGTCTCGATCTGCGACTCGAGGATCGCGAACCAG 32385 Query 221888 AGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCAC---CCTCGGTCTTTTCATACCCGGT 221943 || | ||| |||| | |||| ||| || | ||||| || | ||| | Sbjct 32384 AGCTG-CTGCGCGCGGATCGTC---TTGCGCGCGCGGCCCTCGCGCT---CGTACTGGTG 32332 Query 221944 ATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGG--CGGGA 222001 || ||| || |||| || || ||| | || || || || | ||| | |||| Sbjct 32331 GTACAGCGCCTCGAACTCGTCGCCCCACGTCGTGTAGAGCCCCGG-CGCCTCGTTCGGG- 32274 Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061 || | ||| ||||| | |||| | | ||| | || ||||||||| || ||||||||| Sbjct 32273 CAGAACAGGCTCCACTCGCCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGATCCAC 32214 Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCC 222121 | ||| | |||||||| | | || ||| ||| ||||| ||| ||| | || ||| Sbjct 32213 ATCGCGTAGAAGAGATCACGCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTCTTGAGGTCC 32154 Query 222122 AAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGC 222181 | ||||| || ||||| ||||||||||||||||| || | || | | ||| ||| Sbjct 32153 AGGAACTCGAAGATGTCGGCGTGCCACGGCTCCAGGTACATCGCGAACGAGCCCTTGCGC 32094 Query 222182 TTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACC 222241 ||| ||| ||||| || || | | || ||||||||| ||| || | || || Sbjct 32093 TTGCCGCCGCCCTGGTCGACGTAGCGCGCCGTGTCGTTGAAGACGCGCAGCATGGGCACG 32034 Query 222242 AGTCCGTTGGATCGA-CCGTTGGTGCCCTTAATGTACG-CACCGCCGGCCCTCAGGT--T 222297 || ||||| || ||| ||||| ||||| ||||||| || | || | | || | Sbjct 32033 AGGCCGTTCGA-CGAGCCGTTCGTGCCGCGGATGTACGAGTTCGTC-GCGCGGATGTTGT 31976 Query 222298 ACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGT 222357 | || ||| |||||| || || || || ||||| ||||| |||||| || Sbjct 31975 GCACGCTGAC--GCCGATGCCGCCAGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGT 31918 Query 222358 GTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTG 222417 ||| ||||||||| || ||||| ||||| | | ||||| || || ||||||| ||| Sbjct 31917 GTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGGCGAGCAGGAAGCACGACGACAGCTG 31858 Query 222418 AGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGA 222477 | | | | ||||| |||||||| || | ||||| || ||| ||| || Sbjct 31857 CGGGCGCGGCGTGCCCGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGA 31798 Query 222478 CATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCA 222537 ||| ||||||||||| | | | | |||| || | ||| || | |||| Sbjct 31797 CATGTACTCGTACGTCTCGAGCGCAGCGTCAATGTCGTGCTTGTGGATGCCGACGGCGAC 31738 Query 222538 TCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGC---TGGAGAGCAGGTA 222594 | || ||| | ||| || | |||| | || ||||| || | ||| || || Sbjct 31737 ACGCAGAATCATCTGCTGCGGACGCTCCGC--GA-CCTTGCCGCCGACGCGGAGGAGATA 31681 Query 222595 CGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTG 222648 ||| || || || |||||||| |||||||||| | |||||||| | | |||| Sbjct 31680 CGACTTCTCGAGCGTCTTGAAGCCAAAGTAGTCGTACTCAAAGTCGCGGTCGTG 31627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928740397844480