Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_022988.1 Length=74210 Score E Sequences producing significant alignments: (Bits) Value seq8357 181 5e-41 >seq8357 Length=31560 Score = 181 bits (200), Expect = 5e-41 Identities = 347/505 (69%), Gaps = 21/505 (4%) Strand=Plus/Minus Query 64829 CGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGA 64888 ||| | ||||||||| |||||| || | ||| | | ||||||||| |||||| || | Sbjct 17777 CGCGTTCATCGACGCCGAGCACGCCATCGACGCGCACTACGCCAAGCAGCTCGGCGTCAA 17718 Query 64889 CCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGA 64948 | | ||| | ||| | ||||| ||| | || |||||||| || ||||||| || Sbjct 17717 CATTGACGAGCTCTACATCTCGCAGCCCGACTCGGGGGAGCAGGCGCTTGAGATCGCCGA 17658 Query 64949 CCTCCTCGTCAAGTCTGGCGAGCTGTCCA--TCGTCGTCGTTGACTCTGTGGCGGCCCTG 65006 | ||||| |||||||| | ||| | |||||||||| ||| ||||| || || Sbjct 17657 CACGCTCGTGCGGTCTGGCG--CCGTCGACGTCGTCGTCGTCGACAGCGTGGCCGCGCTC 17600 Query 65007 GTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGC 65066 ||||||||||| || ||||| ||||| || || ||| || ||| ||||| ||||| Sbjct 17599 GTGCCGCGCGCTGAACTCGAGGGCGAGATGGGCGACCAGCAGATCGCGCTGCAGGCGCGA 17540 Query 65067 CTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTC-CAGCA---CCAA---CAC 65119 |||||| ||||| ||||||||||||| || ||| | |||| |||| || Sbjct 17539 CTCATGAGCCAGGCGCTGCGCAAGCTCACGGG----ATCGCTGAGCAAGTCCAACTGCAT 17484 Query 65120 GCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAA 65179 ||| | ||| | |||||| | ||| |||| | |||| | | || || || Sbjct 17483 GCTCA---TCTTTCTGAACCAGATCCGCCAGAAAGTGGGCATCCT---CTTTGGGTCGCC 17430 Query 65180 TGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCG 65239 ||| ||| ||||||||| ||| || | | |||||| || || || | || | || Sbjct 17429 CGAGGTCACGTCGGGCGGCACGGCGCTGCGCTACTACGCGTCGGTGCGGCTCGACATTCG 17370 Query 65240 TCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGT 65299 |||| ||| | ||||||||||| ||| ||||||||| | | || ||||| Sbjct 17369 GCGCAAGGCCGCGATCAAGGAAGGCGACAAGGTCGTCGGCAACGAGATCGTCGTCAAGGT 17310 Query 65300 CGTCAAGAACAAGCTGGCCCCGCCG 65324 || |||||||||||| || ||||| Sbjct 17309 CGCCAAGAACAAGCTCGCGTCGCCG 17285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237321189120352