Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3226 113 1e-19 >seq3226 Length=124924 Score = 113 bits (124), Expect = 1e-19 Identities = 346/528 (66%), Gaps = 8/528 (2%) Strand=Plus/Minus Query 121129 CTTAATCTCGTCAAAGCGTGTCTGAGACCAATCACATGAATCCATCTTGTTGATTCCAAC 121188 ||| ||||||| | || | || ||||| || || || ||||||||||||| || || Sbjct 106892 CTTGATCTCGTTGTAACGAGCCTCCGACCAGTCGCACGAGTCCATCTTGTTGACACCGAC 106833 Query 121189 AATAACTTTCTCAATACCCAAAAGAGCAAGA--ATACGTGCGTGAAAACGTGTTTGACCT 121246 | | | ||||||||| | ||| |||| | ||| ||||| || || || || Sbjct 106832 GACGATCTGCTCAATACCGAG--GAGGAAGAGCAGACGCGCGTGCTGGCGCGTCTGGCCC 106775 Query 121247 TGTGGGATTCC-AGCAGAACGATCGCCTTTCGCAATAGCAGATTCAAAACCAtttttttC 121305 | || || | | | |||||| ||||| || | || |||||| || || Sbjct 106774 TCATCGACACCGATCTTGGGGTCCGCCTTG-GCAATGGCCGCCTCGAAACCACCCTTCTC 106716 Query 121306 AGCAGGAATAAGAATAAAAGCAGCATCGGCTT-GTCCGACGCCTGAAATCATATTCTTAA 121364 || || | ||| || | | | ||||| || | |||| || | ||||| ||||| | Sbjct 106715 GGCCGGGACAAGGATGAGACCGGCATCAGCGCAGCCCGAACCC-GTGATCATGTTCTTGA 106657 Query 121365 TAAAGTCAATATGGCCTGGTGCATCAATAATAGAATAATGATAAGAATCTGTGTAAAATT 121424 | |||| ||||||| || ||||| | || | || || || || ||| | || | Sbjct 106656 TGTAGTCCTTATGGCCAGGAGCATCGACGATCGTGTAGTGGTAGTTGTCCGTGAAGAACT 106597 Query 121425 CCTTAGTATTACAATTTACTGTAATTCCGCGCTCACGCTCTTCCTTGTTGTTATCCATGT 121484 |||| || ||||| | | || | || ||||||||||| |||||| ||||||| | Sbjct 106596 CCTTGGTGTTACACTGGATCGTCACACCACGCTCACGCTCCTCCTTGCACGTATCCATAT 106537 Query 121485 AATAAGCAAATGCAAAACTAGATTTGCCGTTTGCGTCGGCAAGTTCCTGCAACTTCGCCA 121544 | || || || || || || ||||| || || ||||| |||| | ||| |||| Sbjct 106536 AGTACGCGAAGGCGAACGACGACTTGCCCTTGGCATCGGCCTCAGCCTGGAGCTTGGCCA 106477 Query 121545 TCTCACGAGCATTTATGCCTCCCAATTTAAAGATAAGATGACCGGTTGTTGTTGACTTTC 121604 ||||||| | || || || | || ||||| || || || || || || ||||| | Sbjct 106476 TCTCACGCTCGCCGATACCGCCGAGCTTGAAGATGAGGTGGCCCGTCGTGGTCGACTTGC 106417 Query 121605 CCGAGTCAACTTCACCACAGACCACCAAAGATATATGTTGCTTTTCAC 121652 | | || || | || || ||||| | || | ||| ||||| |||| Sbjct 106416 CGGCATCGACGTGGCCGCACACCACAAGCGAAAGATGCTGCTTCTCAC 106369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186676067297312