Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1220 98.7 7e-16 seq2702 96.9 2e-15 >seq1220 Length=9499 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | ||||| || || || ||| || || |||||||| || || Sbjct 260 CCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAC 201 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || || || || |||| |||||||| || |||| Sbjct 200 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGCGGA 141 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| ||| ||||| || | | | ||| | | ||| | ||||| Sbjct 140 ATGCCCTCCTTGTCCTGAATCTTCTGCTTGA-CGTTGTCGATCGAGTCCGACGGCTCCAC 82 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| | ||||||||| || || || | ||| || || ||||||||||| Sbjct 81 GTCGAGCGTGATCGTCTTGCCCGTCAGCGTCTTCACGAAGATCTGCAT 34 >seq2702 Length=56295 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | || || | ||||| || || || ||| || || |||||||| || | Sbjct 26993 CACCACCACGCAGGCGGAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 26934 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 |||| ||||| |||| || | || || ||||| || |||| ||||||||||| | | Sbjct 26933 AGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAG 26874 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | || || ||||| || ||||| || |||| ||| | | |||| | || Sbjct 26873 GGATTCCCTCCTTGTCCTGGATCTTCTGCTT-GACATTGTCAATGCTGTCCGAAGGCTCG 26815 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| | ||||||||| || || || | || || || ||||||||||| Sbjct 26814 ACGTCGAGCGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 26765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328667977328640