Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5045 219 5e-52 seq2601 219 5e-52 >seq5045 Length=16147 Score = 219 bits (242), Expect = 5e-52 Identities = 438/638 (69%), Gaps = 12/638 (2%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 ||||| ||| | ||||| | ||| || | | | ||||| | || |||||||| || Sbjct 9270 ATCTTCAGCGTCGGGAAAGTTCGCGGAGTGCGACCAAGCTGCACCTTGAGGGGCTCGACA 9329 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 |||| ||||||| ||||||||| || | ||||| | || || || | || || Sbjct 9330 TGGTCCAGGTAGATGTGCGCGTCACCAATCGTGTGGATGAACTCGCCAGCACGCAGCCCT 9389 Query 146992 GTCACGTGGGCCACCATGTAG-GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 || || || || || | || | || | ||||| |||||| || |||||||| || || || Sbjct 9390 GTGACCTGCGCGACGA-GTCGCGTCAACAGCGCGTAGCTCGCGATGTTGAATGGCACGCC 9448 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTA 147110 || ||||| || | || | ||||||| ||| || |||||||| || | || ||||| Sbjct 9449 GAGACCCATATCTGCTGAGCGTTGGTACATCTGACAGGAGAGCTCACCATTCGCAACGTA 9508 Query 147111 AAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCA 147170 ||||||||| | ||||||||||||||||||||||| | |||||||| |||||||| Sbjct 9509 AAACTGGCAGAACATGTGGCACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCA 9568 Query 147171 GGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACC 147229 ||||| | | | |||| | || | |||||| |||| | | | ||| ||| | Sbjct 9569 TGCCGACATGATGATGCGCC-GATCGTTCGGGTTCGTCTTGAGTTTGTGGATCACCTCCG 9627 Query 147230 TCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA--GTCCACGTACCTGGCCCC 147287 ||||| || || |||||||| |||| | | | ||| || | |||| |||| || Sbjct 9628 CGAGCTGATCGACTCCCTGGCCAGAGTAG-TCGGCGTGCATCGT-CGTGTACTTGGCTCC 9685 Query 147288 AAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTC--TGTGCGAG 147345 |||||| | |||||||||||| |||||||| || || ||||| | | | ||| |||| Sbjct 9686 AAAGTGGCGCCACTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCGCGATGTCCGAG 9745 Query 147346 AAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTG 147405 ||| | || || | || || || | | | |||||||| | |||||| Sbjct 9746 --GCCGATGCTCTCTAGGTATTCCTTCGATCCATTGCCATCCCAGATCTTGATACCCTTG 9803 Query 147406 GCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACC 147465 | | ||| | | || ||| | ||||||||| |||||||||||| || Sbjct 9804 TCCTGCAATGTCTTGGCATTGGTATCGCCACTGATGAACCACAGCAGCTCCTCCGCGACA 9863 Query 147466 CCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503 || | ||| ||||| | |||||| || ||||| || || Sbjct 9864 CCGCGCCAGAAGACGCGCTTGGTCGTGAGCAGCGGAAA 9901 >seq2601 Length=2056 Score = 219 bits (242), Expect = 5e-52 Identities = 438/638 (69%), Gaps = 12/638 (2%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 ||||| ||| | ||||| | ||| || | | | ||||| | || |||||||| || Sbjct 897 ATCTTCAGCGTCGGGAAAGTTCGCGGAGTGCGACCAAGCTGCACCTTGAGGGGCTCGACA 956 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 |||| ||||||| ||||||||| || | ||||| | || || || | || || Sbjct 957 TGGTCCAGGTAGATGTGCGCGTCACCAATCGTGTGGATGAACTCGCCAGCACGCAGCCCT 1016 Query 146992 GTCACGTGGGCCACCATGTAG-GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 || || || || || | || | || | ||||| |||||| || |||||||| || || || Sbjct 1017 GTGACCTGCGCGACGA-GTCGCGTCAACAGCGCGTAGCTCGCGATGTTGAATGGCACGCC 1075 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTA 147110 || ||||| || | || | ||||||| ||| || |||||||| || | || ||||| Sbjct 1076 GAGACCCATATCTGCTGAGCGTTGGTACATCTGACAGGAGAGCTCACCATTCGCAACGTA 1135 Query 147111 AAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCA 147170 ||||||||| | ||||||||||||||||||||||| | |||||||| |||||||| Sbjct 1136 AAACTGGCAGAACATGTGGCACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCA 1195 Query 147171 GGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACC 147229 ||||| | | | |||| | || | |||||| |||| | | | ||| ||| | Sbjct 1196 TGCCGACATGATGATGCGCC-GATCGTTCGGGTTCGTCTTGAGTTTGTGGATCACCTCCG 1254 Query 147230 TCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA--GTCCACGTACCTGGCCCC 147287 ||||| || || |||||||| |||| | | | ||| || | |||| |||| || Sbjct 1255 CGAGCTGATCGACTCCCTGGCCAGAGTAG-TCGGCGTGCATCGT-CGTGTACTTGGCTCC 1312 Query 147288 AAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTC--TGTGCGAG 147345 |||||| | |||||||||||| |||||||| || || ||||| | | | ||| |||| Sbjct 1313 AAAGTGGCGCCACTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCGCGATGTCCGAG 1372 Query 147346 AAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTG 147405 ||| | || || | || || || | | | |||||||| | |||||| Sbjct 1373 --GCCGATGCTCTCTAGGTATTCCTTCGATCCATTGCCATCCCAGATCTTGATACCCTTG 1430 Query 147406 GCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACC 147465 | | ||| | | || ||| | ||||||||| |||||||||||| || Sbjct 1431 TCCTGCAATGTCTTGGCATTGGTATCGCCACTGATGAACCACAGCAGCTCCTCCGCGACA 1490 Query 147466 CCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503 || | ||| ||||| | |||||| || ||||| || || Sbjct 1491 CCGCGCCAGAAGACGCGCTTGGTCGTGAGCAGCGGAAA 1528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583422415948800