Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq3132 111 5e-19 >seq3132 Length=41768 Score = 111 bits (122), Expect = 5e-19 Identities = 363/547 (66%), Gaps = 28/547 (5%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | || || |||||| || ||| ||||||||||| || || |||||||| ||| Sbjct 32038 CCCATGCTGCGCGTCTTCAACGACACGGCGCGCTACGTCGACCAGGGCGGCGGCAAGCGC 32097 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || ||||| | || ||||||||||||||||||||||||| | || || ||| Sbjct 32098 AAGGGCTCGTTCGCGATGTACCTGGAGCCGTGGCACGCCGACA-TCTTCG--AGTTCCTG 32154 Query 255101 CTGTCCGACAAGA---CCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTC 255157 | | |||| ||||| |||| || ||| || || ||| | ||| | Sbjct 32155 GACCTCAAGAAGAACCACGGCAACGAGCTGCACCGCGCGCGTGATCTCTTCTACGCGATG 32214 Query 255158 TGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGA--GACGAGACCTGGAGCCTCATG 255214 ||| | |||||| || ||| ||||| || | | | |||| |||||||| | Sbjct 32215 TGGATCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGGCGAG---TGGAGCCTGTTC 32271 Query 255215 TGTCCCAACTTATCGCCCGG--TCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGT 255272 || || ||| |||| || |||| ||| | ||||| |||||||| || |||| Sbjct 32272 TGCCCGAACGAGGCGCCGGGGCTCTACACGA--CGTGGGGCGACGAGTTCGAGGCGCTGT 32329 Query 255273 ATCTGGAGTACGAGCGTGCCGGCCG-GTTCGTACGCCAAGTGCCCGCGAAGAAGATCTGG 255331 | | |||||||||| | ||||| | || | | | | | | |||| || || ||||| Sbjct 32330 ACCACCAGTACGAGCGCGAGGGCCGCGCGCGCAAGACGA-TCCGCGCGCAGCAGCTCTGG 32388 Query 255332 AACACGATGGTGCGCAT-GCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGAC-C 255389 | |||| | || | |||| | || || || | ||||| | | || |||| ||| | Sbjct 32389 TTCGCGATCCT-CGAGTCGCAGATCGAGACGGGCACGCCGTACATGCTGTACAAGGACTC 32447 Query 255390 ACATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCG---AACCTGT 255446 || |||| ||||||||| | ||| ||| ||||| | ||||| ||||| | Sbjct 32448 GTGCAACCGCA-AGTCGAACCAGCAGAACCTCGGCACGAT---CCGCTCGAGCAACCTCT 32503 Query 255447 GCACCGAGATTACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCGTCCA 255506 || |||| | | ||||||| | | ||||| || || |||||| | ||||||| Sbjct 32504 GCTGCGAGGTGCTCGAGTACACGTCGCCCGATGAGGTCGCGGTGTGCAACCTCGCGTCCA 32563 Query 255507 TCTCGCT 255513 || |||| Sbjct 32564 TCGCGCT 32570 Score = 84.2 bits (92), Expect = 7e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 256535 CACTTTTACGGGTGGCGAAACGGCCTGAAGACGGGCATGTACTACCTGCGCACCCGACCA 256594 ||||| |||| |||| || || || |||||||||||||||||||||||||| ||||| Sbjct 33391 CACTTCTACGCGTGGAAGAAGGGTCTCAAGACGGGCATGTACTACCTGCGCACGCGACCG 33450 Query 256595 GCGGCCGACCCGATCCAATTCACCGT 256620 ||||||| |||| || ||||| || Sbjct 33451 AAGGCCGACGCGATTCAGTTCACGGT 33476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588153007809440