Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1220 145 7e-30 seq2702 116 3e-21 >seq1220 Length=9499 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| |||||| | || || || || ||||| ||||| Sbjct 33 CATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGGAGCCGTC 92 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||||||| || | ||||| || || ||||| ||||| || ||||| || || || || Sbjct 93 GGACTCGATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATTCCGCCGGACCA 152 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | ||| ||||| || |||| ||| | || | || || ||||| Sbjct 153 GCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACGCTGTCGGACTACAA 212 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 ||| || ||||||||||| | || |||| ||||| |||| ||||||| Sbjct 213 CATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGGCA 262 >seq2702 Length=56295 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||||||| | || || || || || || || || Sbjct 26765 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACGCTCGACGTCGAGCCTTCG 26824 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||| | ||||| || || || || ||||| || || || || || ||||| Sbjct 26825 GACAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCTCCGGATCAG 26884 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || | || ||| | || | || || |||||| Sbjct 26885 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAAC 26944 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || |||| | || |||| ||||| Sbjct 26945 ATCCAGAAGGAGTCGACGCTCCACCTGGTGCTCCGCCTGCGTGGTGG 26991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434869515171840