Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq8357 181 5e-41 >seq8357 Length=31560 Score = 181 bits (200), Expect = 5e-41 Identities = 347/505 (69%), Gaps = 21/505 (4%) Strand=Plus/Minus Query 66619 CGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGA 66678 ||| | ||||||||| |||||| || | ||| | | ||||||||| |||||| || | Sbjct 17777 CGCGTTCATCGACGCCGAGCACGCCATCGACGCGCACTACGCCAAGCAGCTCGGCGTCAA 17718 Query 66679 CCTCGACAACCTCGTGGTGGTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGA 66738 | | ||| | ||| | |||||||| | || |||||||| || ||||||| || Sbjct 17717 CATTGACGAGCTCTACATCTCGCAGCCCGACTCGGGGGAGCAGGCGCTTGAGATCGCCGA 17658 Query 66739 CCTCCTCGTCAAGTCTGGCGAGCTGTCCA--TCGTCGTCGTTGACTCCGTGGCGGCCCTG 66796 | ||||| |||||||| | ||| | |||||||||| ||| |||||| || || Sbjct 17657 CACGCTCGTGCGGTCTGGCG--CCGTCGACGTCGTCGTCGTCGACAGCGTGGCCGCGCTC 17600 Query 66797 GTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGC 66856 ||||||||||| || ||||| ||||| || || ||| || ||| ||||| ||||| Sbjct 17599 GTGCCGCGCGCTGAACTCGAGGGCGAGATGGGCGACCAGCAGATCGCGCTGCAGGCGCGA 17540 Query 66857 CTCATGTCACAGGCCATGCGCAAGCTCACTGGCACCATCTC-CAGCA---CCAA---CAC 66909 |||||| ||||| ||||||||||||| || ||| | |||| |||| || Sbjct 17539 CTCATGAGCCAGGCGCTGCGCAAGCTCACGGG----ATCGCTGAGCAAGTCCAACTGCAT 17484 Query 66910 GCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAA 66969 ||| | ||| | |||||| | ||| |||| | |||| | | || || || Sbjct 17483 GCTCA---TCTTTCTGAACCAGATCCGCCAGAAAGTGGGCATCCT---CTTTGGGTCGCC 17430 Query 66970 TGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGTATGGATGTCCG 67029 ||| ||| ||||||| | ||| || | | |||||| || || || | || | || Sbjct 17429 CGAGGTCACGTCGGGCGGCACGGCGCTGCGCTACTACGCGTCGGTGCGGCTCGACATTCG 17370 Query 67030 TCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGT 67089 |||| ||| | ||||||||||| ||| ||||||||| | | || ||||| Sbjct 17369 GCGCAAGGCCGCGATCAAGGAAGGCGACAAGGTCGTCGGCAACGAGATCGTCGTCAAGGT 17310 Query 67090 CGTCAAGAACAAGCTGGCCCCGCCG 67114 || |||||||||||| || ||||| Sbjct 17309 CGCCAAGAACAAGCTCGCGTCGCCG 17285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242834184884928