Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_029079.1 Length=75339 Score E Sequences producing significant alignments: (Bits) Value seq8357 185 4e-42 >seq8357 Length=31560 Score = 185 bits (204), Expect = 4e-42 Identities = 344/499 (69%), Gaps = 21/499 (4%) Strand=Plus/Minus Query 66248 CATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGA 66307 ||||||||| |||||| || | ||| | | ||||||||| |||||| || || | || Sbjct 17771 CATCGACGCCGAGCACGCCATCGACGCGCACTACGCCAAGCAGCTCGGCGTCAACATTGA 17712 Query 66308 CAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCT 66367 | | ||| | ||||| ||| | || |||||||| || ||||||| ||| || Sbjct 17711 CGAGCTCTACATCTCGCAGCCCGACTCGGGGGAGCAGGCGCTTGAGATCGCCGACACGCT 17652 Query 66368 CGTCAAGTCTGGCGAGCTGTCCA--TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCG 66425 ||| |||||||| | ||| | |||||||||| ||| ||||| || || |||||| Sbjct 17651 CGTGCGGTCTGGCG--CCGTCGACGTCGTCGTCGTCGACAGCGTGGCCGCGCTCGTGCCG 17594 Query 66426 CGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATG 66485 ||||| || ||||| ||||| || || ||| || ||| ||||| ||||| |||||| Sbjct 17593 CGCGCTGAACTCGAGGGCGAGATGGGCGACCAGCAGATCGCGCTGCAGGCGCGACTCATG 17534 Query 66486 TCGCAGGCCATGCGCAAGCTCACCGGCACCATCTC-CAGCA---CCAA---CACGCTGAC 66538 ||||| ||||||||||||| || ||| | |||| |||| || ||| | Sbjct 17533 AGCCAGGCGCTGCGCAAGCTCACGGG----ATCGCTGAGCAAGTCCAACTGCATGCTCA- 17479 Query 66539 GCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGAC 66598 ||| | |||||| | ||| |||| | |||| | | || || || |||| Sbjct 17478 --TCTTTCTGAACCAGATCCGCCAGAAAGTGGGCATCCT---CTTTGGGTCGCCCGAGGT 17424 Query 66599 CACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCAT 66658 ||| ||||||||| ||| || | | |||||| || || || | || | || |||| Sbjct 17423 CACGTCGGGCGGCACGGCGCTGCGCTACTACGCGTCGGTGCGGCTCGACATTCGGCGCAA 17364 Query 66659 CGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAA 66718 ||| | ||||||||||| ||| ||||||||| | | || ||||||| ||| Sbjct 17363 GGCCGCGATCAAGGAAGGCGACAAGGTCGTCGGCAACGAGATCGTCGTCAAGGTCGCCAA 17304 Query 66719 GAACAAGCTGGCCCCGCCG 66737 ||||||||| || ||||| Sbjct 17303 GAACAAGCTCGCGTCGCCG 17285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240933593193600