Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_029093.1 Length=75796 Score E Sequences producing significant alignments: (Bits) Value seq8357 187 1e-42 >seq8357 Length=31560 Score = 187 bits (206), Expect = 1e-42 Identities = 348/505 (69%), Gaps = 21/505 (4%) Strand=Plus/Minus Query 65906 CGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGA 65965 ||| | ||||||||| |||||| || | ||| | | ||||||||| |||||| || | Sbjct 17777 CGCGTTCATCGACGCCGAGCACGCCATCGACGCGCACTACGCCAAGCAGCTCGGCGTCAA 17718 Query 65966 CCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGA 66025 | | ||| | ||| | ||||| ||| | || |||||||| || ||||||| || Sbjct 17717 CATTGACGAGCTCTACATCTCGCAGCCCGACTCGGGGGAGCAGGCGCTTGAGATCGCCGA 17658 Query 66026 CCTCCTCGTCAAGTCTGGCGAGCTGTCCA--TCGTCGTCGTTGACTCTGTGGCGGCCCTG 66083 | ||||| |||||||| | ||| | |||||||||| ||| ||||| || || Sbjct 17657 CACGCTCGTGCGGTCTGGCG--CCGTCGACGTCGTCGTCGTCGACAGCGTGGCCGCGCTC 17600 Query 66084 GTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGC 66143 ||||||||||| || ||||| ||||| || || ||| || ||| ||||| ||||| Sbjct 17599 GTGCCGCGCGCTGAACTCGAGGGCGAGATGGGCGACCAGCAGATCGCGCTGCAGGCGCGA 17540 Query 66144 CTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTC-CAGCA---CCAA---CAC 66196 |||||| ||||| ||||||||||||| || ||| | |||| |||| || Sbjct 17539 CTCATGAGCCAGGCGCTGCGCAAGCTCACGGG----ATCGCTGAGCAAGTCCAACTGCAT 17484 Query 66197 GCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAA 66256 ||| | ||| | |||||| | ||| |||| | |||| | | || || || Sbjct 17483 GCTCA---TCTTTCTGAACCAGATCCGCCAGAAAGTGGGCATCCT---CTTTGGGTCGCC 17430 Query 66257 CGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCG 66316 |||| ||| ||||||||| ||| || | | |||||| || || || | || | || Sbjct 17429 CGAGGTCACGTCGGGCGGCACGGCGCTGCGCTACTACGCGTCGGTGCGGCTCGACATTCG 17370 Query 66317 TCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGT 66376 |||| ||| | ||||||||||| ||| ||||||||| | | || ||||| Sbjct 17369 GCGCAAGGCCGCGATCAAGGAAGGCGACAAGGTCGTCGGCAACGAGATCGTCGTCAAGGT 17310 Query 66377 CGTCAAGAACAAGCTGGCCCCGCCG 66401 || |||||||||||| || ||||| Sbjct 17309 CGCCAAGAACAAGCTCGCGTCGCCG 17285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242395832929184