Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq5045 214 1e-50 seq2601 214 1e-50 >seq5045 Length=16147 Score = 214 bits (236), Expect = 1e-50 Identities = 413/602 (69%), Gaps = 12/602 (2%) Strand=Plus/Plus Query 27130 AGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGG 27189 ||||| ||| || || || || || |||||||||| ||| ||||| || | |||||| Sbjct 9306 AGCTGCACCTTGAGGGGCTCGACATGGTCCAGGTAGATGTGCGCGTCACCAATCGTGTGG 9365 Query 27190 ACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAG 27249 | ||||| || | ||||| ||||| || || | | ||| | || | |||| Sbjct 9366 ATGAACTCGCCAGCACGCAGCCCTGTGACCTGCGCGACGAGTCGCGTCAACAGCGCGTAG 9425 Query 27250 CTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACAC 27309 || |||||||| || || || ||||| ||||| || | || | ||||| | |||||| Sbjct 9426 CTCGCGATGTTGAATGGCACGCCGAGACCCATATCTGCTGAGCGTTGGTACATCTGACAG 9485 Query 27310 GAGAGCTCTCCAT-CGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 |||||||| |||| ||| ||||||||||| || | ||||||||| || || ||||| Sbjct 9486 GAGAGCTCACCATTCGCA-ACGTAAAACTGGCAGAACATGTGGCACGGCGGCAGCGCCAT 9544 Query 27369 GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTT 27428 | ||| |||||||| || ||| ||||||||||| || | ||||| | Sbjct 9545 CTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGCCGATCGTTCGGGTTCGT 9604 Query 27429 CCTGA---TGAGGTCCACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTA 27484 | ||| || || ||| | || |||||||| || ||| || |||||||| Sbjct 9605 CTTGAGTTTGTGGATCAC----CTCCGCGAGCTGATCGACTCCCTGGCCAGAGTAGTCGG 9660 Query 27485 CCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCA 27544 | ||| |||||||| ||||| || || | ||| ||||| || ||||| ||||| | Sbjct 9661 CGTGCATCGTCGTGTACTTGGCTCCAAAGTGGCGCCACTGGAAGCCATACACTGGTCCGA 9720 Query 27545 GGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGG 27604 | || || |||| | || ||| ||| | | || | | || | || || ||| Sbjct 9721 GATCGCCAGCTTCGCGATGTCCGAGGCCGATGCTCTCTAGGTATTCCTTCGATCCATTGC 9780 Query 27605 CGTCCCAGATCTTTACCCCCTTCT-CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACG 27663 | ||||||||||| | ||||| | | | | || |||| || || || |||| | Sbjct 9781 CATCCCAGATCTTGATACCCTTGTCCTGCAATGTC-TTGGCATTGGTATCGCCACTGATG 9839 Query 27664 AACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGA 27723 |||||||||||||||||| |||| | ||| ||||| | |||||||||||| || ||| Sbjct 9840 AACCACAGCAGCTCCTCCGCGACACCGCGCCAGAAGACGCGCTTGGTCGTGAGCAGCGGA 9899 Query 27724 AA 27725 || Sbjct 9900 AA 9901 >seq2601 Length=2056 Score = 214 bits (236), Expect = 1e-50 Identities = 413/602 (69%), Gaps = 12/602 (2%) Strand=Plus/Plus Query 27130 AGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGG 27189 ||||| ||| || || || || || |||||||||| ||| ||||| || | |||||| Sbjct 933 AGCTGCACCTTGAGGGGCTCGACATGGTCCAGGTAGATGTGCGCGTCACCAATCGTGTGG 992 Query 27190 ACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAG 27249 | ||||| || | ||||| ||||| || || | | ||| | || | |||| Sbjct 993 ATGAACTCGCCAGCACGCAGCCCTGTGACCTGCGCGACGAGTCGCGTCAACAGCGCGTAG 1052 Query 27250 CTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACAC 27309 || |||||||| || || || ||||| ||||| || | || | ||||| | |||||| Sbjct 1053 CTCGCGATGTTGAATGGCACGCCGAGACCCATATCTGCTGAGCGTTGGTACATCTGACAG 1112 Query 27310 GAGAGCTCTCCAT-CGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 |||||||| |||| ||| ||||||||||| || | ||||||||| || || ||||| Sbjct 1113 GAGAGCTCACCATTCGCA-ACGTAAAACTGGCAGAACATGTGGCACGGCGGCAGCGCCAT 1171 Query 27369 GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTT 27428 | ||| |||||||| || ||| ||||||||||| || | ||||| | Sbjct 1172 CTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGCCGATCGTTCGGGTTCGT 1231 Query 27429 CCTGA---TGAGGTCCACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTA 27484 | ||| || || ||| | || |||||||| || ||| || |||||||| Sbjct 1232 CTTGAGTTTGTGGATCAC----CTCCGCGAGCTGATCGACTCCCTGGCCAGAGTAGTCGG 1287 Query 27485 CCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCA 27544 | ||| |||||||| ||||| || || | ||| ||||| || ||||| ||||| | Sbjct 1288 CGTGCATCGTCGTGTACTTGGCTCCAAAGTGGCGCCACTGGAAGCCATACACTGGTCCGA 1347 Query 27545 GGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGG 27604 | || || |||| | || ||| ||| | | || | | || | || || ||| Sbjct 1348 GATCGCCAGCTTCGCGATGTCCGAGGCCGATGCTCTCTAGGTATTCCTTCGATCCATTGC 1407 Query 27605 CGTCCCAGATCTTTACCCCCTTCT-CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACG 27663 | ||||||||||| | ||||| | | | | || |||| || || || |||| | Sbjct 1408 CATCCCAGATCTTGATACCCTTGTCCTGCAATGTC-TTGGCATTGGTATCGCCACTGATG 1466 Query 27664 AACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGA 27723 |||||||||||||||||| |||| | ||| ||||| | |||||||||||| || ||| Sbjct 1467 AACCACAGCAGCTCCTCCGCGACACCGCGCCAGAAGACGCGCTTGGTCGTGAGCAGCGGA 1526 Query 27724 AA 27725 || Sbjct 1527 AA 1528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369466705705952