Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2702 143 2e-29 seq1220 141 7e-29 seq7397 86.0 5e-12 >seq2702 Length=56295 Score = 143 bits (158), Expect = 2e-29 Identities = 160/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| ||||| |||||| ||||||||||| || | ||| ||| |||| || Sbjct 26974 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTC 26915 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| ||||||||||| | ||| | || ||||| ||| Sbjct 26914 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTG 26855 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||||||||| || ||| | ||| |||| | | || || || | ||| |||||| Sbjct 26854 GATCTTCTGCTTGACATTGT--CAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTC 26797 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || ||||| |||||||| ||||| Sbjct 26796 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 26765 >seq1220 Length=9499 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||||||||| ||||| |||||| ||||||||||| || | Sbjct 260 CCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAC 201 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| |||| ||||||||||| || || ||||||| |||||||| || | || Sbjct 200 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGCGGA 141 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| ||| ||||||||||| | | | || | ||| | | ||||| Sbjct 140 ATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATCGAGTCCGACGGCTCCACG 81 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || | ||| |||||||| ||||| || |||||||||||||| |||||| Sbjct 80 TCGAGCGTGATCGTCTTGCCCGTCAGCGTCTTCACGAAGATCTGCATG 33 >seq7397 Length=9624 Score = 86.0 bits (94), Expect = 5e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| ||||| |||||| ||||||||||| || | || ||| |||| || Sbjct 4210 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 4269 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 |||||||| ||||| ||||||| ||||||||||| | ||| Sbjct 4270 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGG 4311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359950948652064