Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq247 215 6e-51 >seq247 Length=71432 Score = 215 bits (238), Expect = 6e-51 Identities = 434/637 (68%), Gaps = 8/637 (1%) Strand=Plus/Minus Query 145635 GATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCAC 145694 |||| | ||| | || || | ||| ||| | | | ||||| | ||| || || ||||| Sbjct 59833 GATCTTCAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGAACCTTAAGCGGTTCCAC 59774 Query 145695 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCC 145754 ||||| | ||||| |||||| || || | |||||||||||| || | | || ||| Sbjct 59773 ATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAG-CACGCAGCC 59715 Query 145755 C-GTGAGGTGGGCGACCATGTAG-GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACC 145812 | |||| || |||| | || | |||| ||| | |||||| || ||||| || ||||| Sbjct 59714 CTGTGACCTGCGCGATGA-GTCGAGTCAACAGCGCGTAGCTCGCAATGTTAAAAGGCACG 59656 Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872 || || |||||||| | ||||||||||||| ||| || || ||||| ||| || ||| Sbjct 59655 CCGAGTCCCATGTCAGCTGAGCGCTGGTACATCTGNCACGANAGCTCGCCGTTGGCGACG 59596 Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932 ||||||||||| | | ||| || |||||||| ||||| | || ||||| |||||| Sbjct 59595 TAGAACTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGATCCGCAGGGTTC 59536 Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTC 145991 || || | | || || | | | || | |||||| |||||| || || | || Sbjct 59535 CATGCCGACATGATGATGCGAC-GATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTC 59477 Query 145992 CCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCC 146050 | |||||||| || ||||| || ||| || | | || | | | |||| ||| | Sbjct 59476 CGCNAGCTGGTCGACTCCCTGGCCNGAGTANTC-GGCGTGCATGGTCGTGTACTTGGCAC 59418 Query 146051 CGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCA 146110 | ||||| | ||| ||||| || || || || || || || || | || | || || | Sbjct 59417 CAAAGTGGCGCCANTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGNCCGA 59358 Query 146111 GCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCG 146170 | ||| | | ||| | ||| ||| || || | ||||| || | || |||| | Sbjct 59357 GACCGATGCTNTCCAGGTATTCCTTGGATCCATTNCCATCCCAAATGTGGATGCCCTTGT 59298 Query 146171 CGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCC 146230 | | | |||| || ||| || ||||||||||| | ||||||||| ||| | Sbjct 59297 CCTGCAACGTCTTGGCGTTTGTGTCGCCACTGATGAACCACAACAGCTCTTCCGCGACGC 59238 Query 146231 CCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 | | |||||| || | || || |||||||| ||||| Sbjct 59237 CGCGCCAGAATACGCGNTTNGTCGTCAGCAGNGGGAA 59201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590068007855680