Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq247 129 4e-25 >seq247 Length=71432 Score = 129 bits (142), Expect = 4e-25 Identities = 405/623 (65%), Gaps = 10/623 (2%) Strand=Plus/Minus Query 96999 CTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTG 97058 ||| || || ||||||| || || || || ||||| | | || | || | || Sbjct 59830 CTTCAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGAACCTTAAGCGGTTCCACATG 59771 Query 97059 ATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGT 97118 |||| || ||||| ||||| || | ||||| || || ||||||| | | | || Sbjct 59770 GTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCTGT 59711 Query 97119 GACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAG 97178 ||| || ||||| | | ||| || || | ||||| ||||||||||||||||| || || Sbjct 59710 GACCTGCGCGATGAGTCGAGTCAACAGCGCGTAGCTCGCAATGTTAAAAGGCACGCCGAG 59651 Query 97179 TCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAA 97238 |||||| |||||||| | || || | ||| || || |||| || | || || || Sbjct 59650 TCCCATGTCAGCTGAGCGCTGGTACATCTGNCACGANAGCTCGCCGTTGGCGACGTAGAA 59591 Query 97239 CTGACTCAATACATGACAGGGGGGCAACGCCATTT--TTGGAACATCTAAGACATTCCAA 97296 ||| | || | ||||| || |||| |||||| | ||| | ||| ||||| Sbjct 59590 CTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTG--AGATCCGCAGGGTTCCAT 59533 Query 97297 GCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTT 97356 || |||| | || | | |||| ||||||| || | | | | ||| | || | Sbjct 59532 GCCGACATGATGATGCGACGATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGCN 59473 Query 97357 AATTGATCAACGCCTTCTCCACCATAATTGTGCTT--AAGACCTTGATATTCTGCTCCAA 97414 | || || || || | || || | | || | | | | || || | || |||| Sbjct 59472 AGCTGGTCGACTCCCTGGCCNGAGTANTCG-GCGTGCATGGTCGTG-TACTTGGCACCAA 59415 Query 97415 AATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAAC 97474 | || | ||| ||||| ||||| || ||||| || || || |||| | || | || || Sbjct 59414 AGTGGCGCCANTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGNCCGAGAC 59355 Query 97475 CAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCA-CACCAGATGCT 97533 | | | || | || | | |||||||| ||||||||||||| | || | || Sbjct 59354 CGATGCTNTCCAGGTATTCCTTGGATCCATTNCCATCCCAAATGTGGATGCCCTTGTCCT 59295 Query 97534 GCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCT 97593 |||| |||| || || || || ||||| |||||||||| |||||| | || || Sbjct 59294 GCAACGTCTTGGC-GTTTGTGTCGCCACTGATGAACCACAACAGCTCTTCCGCGACGCCG 59236 Query 97594 CTCCAAAATACTCTCTTAGTTGT 97616 | ||| ||||| | || || || Sbjct 59235 CGCCAGAATACGCGNTTNGTCGT 59213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346778962095440