Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq6 132 6e-26 >seq6 Length=416345 Score = 132 bits (146), Expect = 6e-26 Identities = 389/591 (66%), Gaps = 13/591 (2%) Strand=Plus/Minus Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633 ||| || || ||||| |||||||| ||||||||||| | || | ||||| || | Sbjct 382279 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 382220 Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693 | |||| || ||||| ||||| ||||| || ||||| || || || ||| || || | Sbjct 382219 AGCTGAGGCCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAACGAGCCCG 382160 Query 33694 AAAAG-AAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC-- 33750 | ||| ||||| || || || ||||| || || | | | ||| | | |||||| Sbjct 382159 AGAAGTAAGATGCCCTCGACAGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGG 382100 Query 33751 TGTCATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33808 | | || |||||| | ||||| | ||||||||| | ||||| || ||||| || Sbjct 382099 CGCGAAGTCGCACCACTTGAGCGCCCAGTGGGCCTTCTTCTGCACACAGGGGATCGTCTC 382040 Query 33809 TATGG-CATTAAAGAGATAGtt-tttttCATTACTATCTTTAACATAAGTATCGATCAAA 33866 |||| | | || | ||| || | | | || || | || || ||||| | Sbjct 382039 GATGGTCGCGNAGAAGGTGGTTCTTCTACGGTCTGGTCCTTGATGTACGTGTCGATGAGC 381980 Query 33867 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 33926 || |||| ||||| || ||||| ||||| || ||||| || |||||||| || | Sbjct 381979 AGCGAGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCGTAGAAGCAACGC 381920 Query 33927 GCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC--TGCTAAATTTTCATTCACTATTC 33984 ||||| | || |||||| || | | || |||| | | || || || || || | Sbjct 381919 GCCTCAGGAACCTGCACCTCGCTGCTGAA--GTTCATCNCGAGGTTCTCGTTGACGATGC 381862 Query 33985 CATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA 34044 |||||||||| || || ||||| | || || || ||||| || |||| || | Sbjct 381861 CATCACTGGCCGCGAAGAACGCGAGCACGTGCTTGATAAAGTAGCGCTCGTTGTCCGTGA 381802 Query 34045 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 34104 | || ||||| || |||| || | | || | ||||| | ||||| || | Sbjct 381801 GGTTGTTCCAGTCCTTGAGGTCGTGCACGAGGTCGATCTCTTCAGCCGTCCAGAAGCTCG 381742 Query 34105 CCTCTGCCTTTTTATACATA--TTCCAGATGTCATGATATTGGATTGGGAA 34153 |||| ||||| || |||||| |||||| || | | ||||| ||||| Sbjct 381741 CCTCAGCCTTCTTGTACATACTGTCCAGACCTCGTTCTCCTGGATCGGGAA 381691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629808215717760