Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq150 82.4 6e-11 seq20 82.4 6e-11 >seq150 Length=112013 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| ||||| ||| |||||||| || || ||||| |||| || || | | ||||| Sbjct 82395 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCATCCTC 82454 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 |||||| || || || | || || | |||||| ||| || | |||||| ||||| Sbjct 82455 CAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 82514 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011 ||| ||||| || || | | ||| | || ||||| |||| || || || || Sbjct 82515 AATCTTCTGCTTCACGTTGTCGATCGAGTCCGACGGCTCGACATCGAGTGTGATCGTCTT 82574 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || || | || || ||||| || ||||| || Sbjct 82575 GCCCGTCAGCGTCTTCACAAAGATCTGCATCTT 82607 >seq20 Length=315411 Score = 82.4 bits (90), Expect = 6e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 33502 CGCACGGCGGCGTGCTCGCCGACGACATGGGACTCGGCAAAACGCTGTCCATGCTCATGC 33561 ||| ||||||||||||||| |||||||||||||||||||| |||||| |||||| | Sbjct 137374 CGCTCGGCGGCGTGCTCGCGGACGACATGGGACTCGGCAAGACGCTGCAGGTGCTCACGG 137433 Query 33562 TCATCGCG 33569 |||||||| Sbjct 137434 TCATCGCG 137441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414566777293648