Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq150 84.2 2e-11 >seq150 Length=112013 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || | || || | |||||||||||||| || || | Sbjct 82413 CTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAA 82472 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 || | ||||||||| ||| ||| | | ||||||||| ||| |||||||| | | Sbjct 82473 GATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTT 82532 Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712 | || || | || | | ||| |||| ||| || || || || || || || ||| Sbjct 82533 GTCG--ATCGAGTCCGACGGCTCGACATCGAGTGTGATCGTCTTGCCCGTCAGCGTCTTC 82590 Query 48713 ACAAAAATCTGCATCGTGT 48731 ||||| ||||||||| ||| Sbjct 82591 ACAAAGATCTGCATCTTGT 82609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421245080273192