Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq6 129 7e-25 >seq6 Length=416345 Score = 129 bits (142), Expect = 7e-25 Identities = 388/591 (66%), Gaps = 13/591 (2%) Strand=Plus/Minus Query 33296 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 33355 ||| || || ||||| |||||||| ||||||||||| | || || ||||| || | Sbjct 382279 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 382220 Query 33356 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAG 33415 | |||| || ||||| ||||| ||||| || ||||| || || || ||| || || | Sbjct 382219 AGCTGAGGCCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAACGAGCCCG 382160 Query 33416 AAAAG-AAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC-- 33472 | ||| ||||| || || || ||||| || || | | | ||| | | |||||| Sbjct 382159 AGAAGTAAGATGCCCTCGACAGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGG 382100 Query 33473 TGTCATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33530 | | || |||||| | ||||| | ||||||||| | ||||| || ||||| || Sbjct 382099 CGCGAAGTCGCACCACTTGAGCGCCCAGTGGGCCTTCTTCTGCACACAGGGGATCGTCTC 382040 Query 33531 TATGG-CATTAAAGAGATAGtt-tttttCATTACTATCTTTAACATAAGTATCGATCAAA 33588 |||| | | || | ||| || | | | || || | || || ||||| | Sbjct 382039 GATGGTCGCGNAGAAGGTGGTTCTTCTACGGTCTGGTCCTTGATGTACGTGTCGATGAGC 381980 Query 33589 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 33648 || |||| ||||| || ||||| ||||| || ||||| || |||||||| || | Sbjct 381979 AGCGAGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCGTAGAAGCAACGC 381920 Query 33649 GCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC--CGCCAAATTTTCATTCACTATTC 33706 ||||| | || ||| || || | | || |||| | | | || || || || || | Sbjct 381919 GCCTCAGGAACCTGCACCTCGCTGCTGAA--GTTCATCNCGAGGTTCTCGTTGACGATGC 381862 Query 33707 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA 33766 | |||||||| || || ||||| | || || || ||||| || |||| || | Sbjct 381861 CATCACTGGCCGCGAAGAACGCGAGCACGTGCTTGATAAAGTAGCGCTCGTTGTCCGTGA 381802 Query 33767 GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATG 33826 | || ||||| || |||| || | | || | ||||| | ||||| || | Sbjct 381801 GGTTGTTCCAGTCCTTGAGGTCGTGCACGAGGTCGATCTCTTCAGCCGTCCAGAAGCTCG 381742 Query 33827 CCTCTGCCTTTTTATACAT--GTTCCAGATGTCATAATATTGGATTGGGAA 33875 |||| ||||| || ||||| |||||| || | | ||||| ||||| Sbjct 381741 CCTCAGCCTTCTTGTACATACTGTCCAGACCTCGTTCTCCTGGATCGGGAA 381691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622937918086720