Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq436 91.5 1e-13 seq58 91.5 1e-13 >seq436 Length=23449 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| || | || || ||| || || || || || Sbjct 881 CGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCC 940 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| |||| || ||||| || |||||||| || || || ||||| ||||| || || Sbjct 941 GGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGCTT 1000 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | |||| | |||| | | |||||||| | || | ||| |||||||||||||| Sbjct 1001 GACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTCAGAGT 1060 Query 114365 TTTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 1061 CTTGACGAAGATCTGCAT 1078 >seq58 Length=197190 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| || | || || ||| || || || || || Sbjct 84965 CGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCC 85024 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| |||| || ||||| || |||||||| || || || ||||| ||||| || || Sbjct 85025 GGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGCTT 85084 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | |||| | |||| | | |||||||| | || | ||| |||||||||||||| Sbjct 85085 GACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTCAGAGT 85144 Query 114365 TTTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 85145 CTTGACGAAGATCTGCAT 85162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420128296497504