Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq247 145 7e-30 >seq247 Length=71432 Score = 145 bits (160), Expect = 7e-30 Identities = 381/581 (66%), Gaps = 5/581 (1%) Strand=Plus/Minus Query 20191 GTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATG 20250 ||||||||| ||||| || | |||||| || || || || | | || || || || || Sbjct 59764 GTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCTGTGACCTG 59705 Query 20251 AGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCAT 20310 || | | ||| || || | ||||| |||||||||||||| || || | ||||| Sbjct 59704 CGCGATGAGTCGAGTCAACAGCGCGTAGCTCGCAATGTTAAAAGGCACGCCGAGTCCCAT 59645 Query 20311 GTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACA 20370 ||| | || | ||| |||| ||| || || ||||| |||| || || || || || || Sbjct 59644 GTCAGCTGAGCGCTGGTACATCTGNCACGANAGCTCGCCGTTGGCGACGTAGAACTGGCA 59585 Query 20371 TAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACAT 20430 |||| |||||| ||||| ||||||||| | | ||||| |||||||| || |||| Sbjct 59584 GAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGATCCGCAGGGTTCCATGCCGACAT 59525 Query 20431 AATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTC 20490 ||||| | | ||||| || || | || | | | | | || | ||||| Sbjct 59524 GATGATGCGACGATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGCNAGCTGGTC 59465 Query 20491 AAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCA 20550 | |||||||| | || || || | | | | |||| || |||||||| | ||| Sbjct 59464 GACTCCCTGGCCNGAGTANTCGGCGTGCATGGTCGTGTACTTGGCACCAAAGTGGCGCCA 59405 Query 20551 CTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGC 20610 ||||| || || || ||||| | ||| || | | || | || ||| | | Sbjct 59404 NTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGNCCGAGACCGATGCTNTC 59345 Query 20611 CAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA-CTCCTGTTCTTGAAAGCTCCC 20669 |||| | ||| |||| ||||| ||||| || | || ||| || || || | | Sbjct 59344 CAGGTATTCCTTGGATCCATTNCCATCCCAAATGTGGATGCCCTTGTCCTGCAA-CGTCT 59286 Query 20670 TGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACA 20729 ||| || || || | | ||||| | |||||||| | | ||||| ||||| || | Sbjct 59285 TGGCGTTTGTGTCGCCACTGATGAACCACAACAGCTCTTCCGCGACGCCGCGCCAGAATA 59226 Query 20730 CCCGCTTTGTGGTTAGTA-AGGGAAA--GTGGTCCCGCAGA 20767 | || || || || || | ||||| || ||| |||||| Sbjct 59225 CGCGNTTNGTCGTCAGCAGNGGGAANATGTTGTCACGCAGA 59185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441366223545280