Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq150 129 4e-25 seq575 120 2e-22 seq436 95.1 8e-15 seq58 95.1 8e-15 seq378 86.0 4e-12 >seq150 Length=112013 Score = 129 bits (142), Expect = 4e-25 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | || |||| |||||||| || || || || Sbjct 82414 TCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAG 82473 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||||||| || ||| Sbjct 82474 ATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTG 82533 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | ||||| || | ||| ||||||| || || || || ||||| || ||||||||| Sbjct 82534 TCGATCGAGTCCGACGGCTCGACATCGAGTGTGATCGTCTTGCCCGTCAGCGTCTTCACA 82593 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 82594 AAGATCTGCATCTT 82607 Score = 120 bits (132), Expect = 2e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | || |||| |||||||| || || || || Sbjct 90857 TCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAG 90798 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||||||| || ||| Sbjct 90797 ATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTG 90738 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | ||||| || | ||| || || | || || || || ||||| || ||||||||| Sbjct 90737 TCGATCGAGTCCGACGGCTCGACGTCAAGCGTGATCGTCTTGCCCGTCAGCGTCTTCACA 90678 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 90677 AAGATCTGCAT 90667 >seq575 Length=11535 Score = 120 bits (132), Expect = 2e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | || |||| |||||||| || || || || Sbjct 1979 TCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAG 1920 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||||||| || ||| Sbjct 1919 ATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTG 1860 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | ||||| || | ||| || || | || || || || ||||| || ||||||||| Sbjct 1859 TCGATCGAGTCCGACGGCTCGACGTCAAGCGTGATCGTCTTGCCCGTCAGCGTCTTCACA 1800 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 1799 AAGATCTGCAT 1789 >seq436 Length=23449 Score = 95.1 bits (104), Expect = 8e-15 Identities = 142/198 (72%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | || |||| || ||||| || ||||| || Sbjct 888 TCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAG 947 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| |||||||| ||||| || Sbjct 948 ATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTGAC--AT 1005 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | || || | ||| | ||| || |||| || || || || || || |||||||| Sbjct 1006 --TGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTCAGAGTCTT 1063 Query 34967 CACAAAGATCTGCATATT 34984 || ||||||||||| || Sbjct 1064 GACGAAGATCTGCATCTT 1081 >seq58 Length=197190 Score = 95.1 bits (104), Expect = 8e-15 Identities = 142/198 (72%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | || |||| || ||||| || ||||| || Sbjct 84972 TCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAG 85031 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| |||||||| ||||| || Sbjct 85032 ATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTGAC--AT 85089 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | || || | ||| | ||| || |||| || || || || || || |||||||| Sbjct 85090 --TGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTCAGAGTCTT 85147 Query 34967 CACAAAGATCTGCATATT 34984 || ||||||||||| || Sbjct 85148 GACGAAGATCTGCATCTT 85165 >seq378 Length=32279 Score = 86.0 bits (94), Expect = 4e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | || |||| |||||||| || || || || Sbjct 133 TCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAG 74 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACG 34907 || || || |||||||| |||| | ||||||||||| ||||||||| || ||| Sbjct 73 ATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACG 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324628883885376