Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq575 105 5e-18 seq150 105 5e-18 >seq575 Length=11535 Score = 105 bits (116), Expect = 5e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || || || || || || ||||| || | | || | | |||| |||| ||| Sbjct 1991 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCATCCTCCAGCTGC 1932 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || |||| |||||| || || ||||| ||||| || || || ||||| || Sbjct 1931 TTGCCAGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTC 1872 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || || | || | | ||| |||| || || ||||| |||| ||| ||||| || Sbjct 1871 TGCTTCACGTTGTCGATCGAGTCCGACGGCTCGACGTCAAGCGTGATCGTCTTGCCCGTC 1812 Query 101447 AAAGTTTTTACAAATATCTGCATGGT 101472 | || || ||||| ||||||||||| Sbjct 1811 AGCGTCTTCACAAAGATCTGCATGGT 1786 >seq150 Length=112013 Score = 105 bits (116), Expect = 5e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || || || || || || ||||| || | | || | | |||| |||| ||| Sbjct 90869 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCATCCTCCAGCTGC 90810 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || |||| |||||| || || ||||| ||||| || || || ||||| || Sbjct 90809 TTGCCAGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTC 90750 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || || | || | | ||| |||| || || ||||| |||| ||| ||||| || Sbjct 90749 TGCTTCACGTTGTCGATCGAGTCCGACGGCTCGACGTCAAGCGTGATCGTCTTGCCCGTC 90690 Query 101447 AAAGTTTTTACAAATATCTGCATGGT 101472 | || || ||||| ||||||||||| Sbjct 90689 AGCGTCTTCACAAAGATCTGCATGGT 90664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396272643065544