Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq150 89.7 4e-13 seq378 84.2 2e-11 seq575 82.4 6e-11 >seq150 Length=112013 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||| || ||||| || || | || ||||| || || || |||| ||| | Sbjct 82607 AAGATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACACTCGATGTCGAGCCG 82548 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || | ||| | | || || || |||||| || || || ||| | || ||| Sbjct 82547 TCGGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCGGAC 82488 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||| | || || | || || || ||||||||||| | | || || |||||||| Sbjct 82487 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCGGACTAC 82428 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAAT 107786 ||||| || |||||||| ||| ||||| ||||| || | |||| || || ||| Sbjct 82427 AACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGGCAAT 82374 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 107623 TCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGAC 107682 ||| | | || || || |||||| || || || ||| | || ||| |||||| | | Sbjct 90734 TCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGTC 90793 Query 107683 TTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAA 107742 | || | || || || ||||||||||| | | || || ||||||||||||| || | Sbjct 90794 TGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCGGACTACAACATCCAGA 90853 Query 107743 AGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAAT 107786 ||||||| ||| ||||| ||||| || | |||| || || ||| Sbjct 90854 AGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGGCAAT 90897 >seq378 Length=32279 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 107623 TCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGAC 107682 ||| | | || || || |||||| || || || ||| | || ||| |||||| | | Sbjct 10 TCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGTC 69 Query 107683 TTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAA 107742 | || | || || || ||||||||||| | | || || ||||||||||||| || | Sbjct 70 TGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCGGACTACAACATCCAGA 129 Query 107743 AGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAAT 107786 ||||||| ||| ||||| ||||| || | |||| || || ||| Sbjct 130 AGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGGCAAT 173 >seq575 Length=11535 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 107623 TCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGAC 107682 ||| | | || || || |||||| || || || ||| | || ||| |||||| | | Sbjct 1856 TCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGTC 1915 Query 107683 TTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAA 107742 | || | || || || ||||||||||| | | || || ||||||||||||| || | Sbjct 1916 TGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCGGACTACAACATCCAGA 1975 Query 107743 AGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||| ||| ||||| ||||| || | |||| || || Sbjct 1976 AGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGG 2015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398871005317288