Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08]
1,192 sequences; 53,239,050 total letters
Query= NC_023848.1
Length=163023
Score E
Sequences producing significant alignments: (Bits) Value
seq172 82.4 8e-11
seq4 82.4 8e-11
>seq172
Length=101696
Score = 82.4 bits (90), Expect = 8e-11
Identities = 114/160 (71%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 22095 AGATCTTCATAGGACCCACATATTACCACAGACTCAAACATATGGTCAAGGACAAGATGC 22154
|||||||||| || || || | ||||| | ||||| ||||||||| | |||||||| |
Sbjct 95234 AGATCTTCATCGGTCCGACGTTCTACCAGCGTCTCAAGCATATGGTCGACGACAAGATCC 95175
Query 22155 ACGCCCGATCCCACGGCCAGGTGACGACGTTGCACCGGCAGCCGAACTGTGGGCGTGCTC 22214
|| | || || | ||||| ||||||| | || || ||||| | || ||||| |
Sbjct 95174 ACTCGCGCTCGCGCGGCCCCGTGACGATGCTGACGCGCCAGCCTATGGAGGGTCGTGCGC 95115
Query 22215 AGGGCGGCGGGCTGCGGTTCGGAGAGATGGAGAAGGACTG 22254
| || || ||||| | |||||||||||| |||||
Sbjct 95114 GAGAAGGTGGTCTGCGTATGGGAGAGATGGAGCGTGACTG 95075
>seq4
Length=466381
Score = 82.4 bits (90), Expect = 8e-11
Identities = 114/160 (71%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 22095 AGATCTTCATAGGACCCACATATTACCACAGACTCAAACATATGGTCAAGGACAAGATGC 22154
|||||||||| || || || | ||||| | ||||| ||||||||| | |||||||| |
Sbjct 10058 AGATCTTCATCGGTCCGACGTTCTACCAGCGTCTCAAGCATATGGTCGACGACAAGATCC 9999
Query 22155 ACGCCCGATCCCACGGCCAGGTGACGACGTTGCACCGGCAGCCGAACTGTGGGCGTGCTC 22214
|| | || || | ||||| ||||||| | || || ||||| | || ||||| |
Sbjct 9998 ACTCGCGCTCGCGCGGCCCCGTGACGATGCTGACGCGCCAGCCNATGGAGGGTCGTGCGC 9939
Query 22215 AGGGCGGCGGGCTGCGGTTCGGAGAGATGGAGAAGGACTG 22254
| || || ||||| | |||||||||||| |||||
Sbjct 9938 GAGAAGGTGGTCTGCGTATGGGAGAGATGGAGCGCGACTG 9899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521537828970560
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |