Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq247 113 5e-20 >seq247 Length=71432 Score = 113 bits (124), Expect = 5e-20 Identities = 182/257 (71%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 142554 TCGTCACATCGTCA---CCGCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCC 142610 ||||| |||| ||| | || ||||||||||| || || | || ||||| || || || Sbjct 59512 TCGTCGCATCATCATGTCGGCATGGAACCCTGCGGATCTCAAGGAGATGGCGCTGCCGCC 59571 Query 142611 GTGTCACATGATGTTCCAATTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTA 142670 |||||||||| | | ||| ||| |||||| | | | | | || || || ||| |||| Sbjct 59572 GTGTCACATGTTCTGCCAGTTCTACGTCG--CCAACGGCGAG-CTNTCGTGNCAGATGTA 59628 Query 142671 TCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCT 142730 ||||| || || ||| | |||||||| || || |||||||| |||||||| | Sbjct 59629 CCAGCGCTCAGCTGACATGGGACTCGGCGTGCCTTTTAACATTGCGAGCTACGCGCTGTT 59688 Query 142731 CACACAGCTCATTGCTCGCGAATGCGGTCTG-GAACTCGGAGACTTCGTCCACACCTTCG 142789 || | ||||| || | | || ||| | || ||||||||| ||||||| ||| Sbjct 59689 GACTCGACTCATCGCGCAGGTCACAGGGCTGCGTGCT-GGAGACTTCATCCACACGATCG 59747 Query 142790 GCAATTCGCACATCTAC 142806 || || ||||||||||| Sbjct 59748 GCGATGCGCACATCTAC 59764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500491742561920