Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq247 214 2e-50 >seq247 Length=71432 Score = 214 bits (236), Expect = 2e-50 Identities = 433/637 (68%), Gaps = 10/637 (2%) Strand=Plus/Minus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 ||||| ||| | ||||| | || ||| | | | | ||||||| || || || ||||| Sbjct 59832 ATCTTCAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGAACCTTAAGCGGTTCCACA 59773 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 ||||| | ||||| |||||| || || | ||||| | ||||| || | || || Sbjct 59772 TGGTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCT 59713 Query 146992 GTCACGTGGGCCACCATGTAG-GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 || || || || | | || | || | ||||| |||||| || ||||| || || || || Sbjct 59712 GTGACCTGCGCGATGA-GTCGAGTCAACAGCGCGTAGCTCGCAATGTTAAAAGGCACGCC 59654 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTA 147110 || |||||||| | || | |||||||| ||| ||||| ||||| |||| ||| ||||| Sbjct 59653 GAGTCCCATGTCAGCTGAGCGCTGGTACATCTGNCACGANAGCTCGCCGTTGGCGACGTA 59594 Query 147111 AAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCA 147170 |||||||| | ||||| ||||||||||||||||| | || ||||| |||||||| Sbjct 59593 GAACTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGATCCGCAGGGTTCCA 59534 Query 147171 GGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACC 147229 ||||| | | | || | | || | |||||| |||| | || | || ||| | Sbjct 59533 TGCCGACATGATGATGCGAC-GATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCG 59475 Query 147230 TCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCA 147288 |||||||| || |||||||| ||| | | | ||| | | |||| |||| ||| Sbjct 59474 CNAGCTGGTCGACTCCCTGGCCNGAGTA-NTCGGCGTGCATGGTCGTGTACTTGGCACCA 59416 Query 147289 AAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTC--TGTGCGAGA 147346 ||||| | ||| |||||||| |||||||| || || ||||| | | | || ||||| Sbjct 59415 AAGTGGCGCCANTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGNCCGAGA 59356 Query 147347 AGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGG 147406 || | | || | || ||| || | | ||||| ||| | |||||| Sbjct 59355 --CCGATGCTNTCCAGGTATTCCTTGGATCCATTNCCATCCCAAATGTGGATGCCCTTGT 59298 Query 147407 CGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCC 147466 | | | ||| | || ||| ||| | ||||||||| | |||||| ||| || | Sbjct 59297 CCTGCAACGTCTTGGCGTTTGTGTCGCCACTGATGAACCACAACAGCTCTTCCGCGACGC 59238 Query 147467 CCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503 | | ||| || || | || || |||||||| ||||| Sbjct 59237 CGCGCCAGAATACGCGNTTNGTCGTCAGCAGNGGGAA 59201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583479306028800