Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq12 134 1e-26 seq436 123 3e-23 seq58 123 3e-23 seq150 120 3e-22 seq575 114 1e-20 seq378 95.1 1e-14 seq43 86.0 6e-12 >seq12 Length=344370 Score = 134 bits (148), Expect = 1e-26 Identities = 911/1435 (63%), Gaps = 67/1435 (5%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || || ||| | ||||||| || || ||||| ||| | ||||| |||||||| | Sbjct 163373 CAGCAGATGATTCTGCGCGTCGCTGTCGGCATCCACAAGCATGACATCGACGCCGCGCTC 163314 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTT----ACGCACGCTTCGCCCACCATGTT 7679 || |||||| | ||||| | || || || |||||||| |||| || |||| Sbjct 163313 GAGACGTACGAGTACATGTC---GCAA-AGCTTCTTCACGCACGCGACGCCGACGCTGTT 163258 Query 7680 TGCCGCGGGCACAAACGCGCCT-CAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAG 7738 ||| ||||| |||||| || |||| ||||| || |||| ||||| || | Sbjct 163257 CAACGCCGGCACGC-CGCGCCCGCAGCTGTCGTCGTGCTTCCTGCTCGCCATGAAGGANG 163199 Query 7739 ACAGCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCG 7798 || ||||| ||||| || ||||||| | |||||| || ||||| | | || Sbjct 163198 ACTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCCTGCATCTCCAAGTGGGCCG 163139 Query 7799 GCGGAATAGGTCTGAACGTAAACGACGTGCGCGC---CAACG-GTAGCCGCATC-GTGTC 7853 |||| || ||| | | ||| || || | ||||| ||| ||| |||| ||| | Sbjct 163138 GCGGCATTGGTGTCAGCGTGCACAACATCCGCGCGACNAACTCGTA----CATCCGTGGC 163083 Query 7854 CACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCG 7913 || ||||| | | ||| | | ||||||| ||||||||||||| || ||| ||| Sbjct 163082 -ACGAACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTGTTCAACGACACGGCGCG 163024 Query 7914 ACATGTAGACCAG---GGGGGAAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTG 7970 |||| || ||| || || |||||||| ||| | || || ||| | |||||||| Sbjct 163023 TTATGTGGATCAGGGTGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTATCTCGAGCCGTG 162964 Query 7971 GCACGCGGACATTTACGCAGTGCTAAATCT-GCGTCGCAACATGGGTTGCGAAGA-CAGC 8028 |||||| ||||| | || | || | || | | | || | || | || | || Sbjct 162963 GCACGCCGACATCTTCGAGTTCCTCGACCTCAAGAAGAACCACG----GCAACGAGCTGC 162908 Query 8029 AAAGCG--CGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTC 8086 | ||| || ||||| |||| || ||||| | |||||||| || |||| ||||||| Sbjct 162907 ACCGCGCTCGTGATCTGTTCTACGCGATGTGGATTCCCGATCTCTTCATGAAGCGCGTTG 162848 Query 8087 ATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGCCC---TTTATTAAAAAACG 8143 | | ||| | ||| || | || ||||| || || | | || | ||| Sbjct 162847 AGGCCAACGGCGAGTGGAGCCTGTTCTG-CCCGAACGAGGCACCGGGTCTCTACACNACG 162789 Query 8144 TTTACGGTTCAAAATTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGC 8203 | ||| | || || ||||| | || ||||| | ||| ||| || || || Sbjct 162788 --TGGGGTGACGAGTTCGAGGCGCTGTACCANCAGTACGAGCGCGAGGGC-CG--CGCGC 162734 Query 8204 GGCAAGTGAAAGCGCGCG-ACCTGCACCG---CGCCATTATCGAATGTCAAAACGAAACC 8259 ||||| | |||||| | | || | | ||| || |||| | || | ||| || Sbjct 162733 -GCAAGACGATCCGCGCGCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATCGAGACG 162675 Query 8260 GGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTG 8319 || | |||||||||||||||||| ||| | || ||| ||| || || ||| | Sbjct 162674 GGCACGCCGTACATGCTGTACAAGGACTCGTGTAACCGCAAGTCGAACCAGCAGAACCTC 162615 Query 8320 GGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAA 8379 ||||| || | | ||||| || ||| || | | |||||| |||||||||| Sbjct 162614 GGCACGATCCGCTCGAGCAACCTCTGCTGCGAGGTGCTCGAGTACACGTCGCCCGACGAG 162555 Query 8380 GTGGCCGTTTGCAATCTAGCG----TCGGTGTGTTTAAACGCGTTCGTTGATCGACGCTC 8435 || || || ||||| || ||| ||| ||| || ||| | ||| ||||| Sbjct 162554 GTCGCGGTGTGCAACCTCGCGTCCATCGCGCTGTCCAA----GTTTG-TGAACGACG--A 162502 Query 8436 AAACACTTACGACTTTGAACAATTGAAAAACGCCGTGCAAGTGACGGTA--CGCAATTTA 8493 || || | |||||| | | || | || | |||| | || | ||||| | Sbjct 162501 CAAGACCTTCGACTTCAAGAAGCTGTACGACATC-ACCAAG-GTCGTCACGCGCAACCTC 162444 Query 8494 GATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAG-CGCGCGTATCGAACATGCG 8552 | |||| || |||| | || || | || | || ||| | | ||| |||| Sbjct 162443 AACAAGGTCATCGANATCAACTACTACCCGATCCCCGAGGCCGAGCGAAGC-AACCTGCG 162385 Query 8553 CCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCT 8612 |||| | || | ||| | |||||||| ||||| || |||||||| | | || || Sbjct 162384 CCACCGCCCGATCGGCATCGGCGTGCAGGGTCTCGCGGACGCGTTCATCCTCATGGGCTA 162325 Query 8613 CCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTA 8672 | | | || ||| | || || ||| |||||||| || || || ||| |||| | Sbjct 162324 CGCGTTTGAGAGCGACGAGGCNCGCGAGCTCAACAAGAACATCTTCGAGACGCTGTACTT 162265 Query 8673 CGGCGCATTAGAAGCC-AGCTGTCAACTTGCCCGAGAATTGGGCACGTACGAATCGTACG 8731 |||||| | || ||| | || | || || || ||| |||||| |||| Sbjct 162264 CGGCGCGATGGAGGCCTCGATG-GAGCTCGCGAAGGAGCACGGCCCGTACGCCAGCTACG 162206 Query 8732 CGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCACGCCCACCT 8791 |||| || | ||| || || || || |||||||||||| |||||||| || | Sbjct 162205 AGGGCTCACCCGTGAGCAAGGGCATCTTCCAGTACGACATGTGGGGCGTCACGCCGACGT 162146 Query 8792 C---TTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTTGCGCAATT 8848 | | ||| | ||| || | || || | || || | ||| ||||||| | Sbjct 162145 CCGGCCTCTGGGACTGGGCCGCGCTCAAGGCCAGCGTCGCGCAGTACGGCGTGCGCAACT 162086 Query 8849 CGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAAT 8908 ||||| || | || ||||| || || |||| || || || | || |||||||| | Sbjct 162085 CGCTGCTGCTCGCGCCGATGCCGACGGCGTCGACCGCGCAGATCCTCGGCAACAACGAGT 162026 Query 8909 CCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCGGCGATTT 8963 | | ||||||||||| | |||| ||||| | || ||| | || ||||| || Sbjct 162025 CGATCGAGCCGTTCACGACCAACATGTACAACCGCCGCGTGCTTGCAGGCGAGTT 161971 >seq436 Length=23449 Score = 123 bits (136), Expect = 3e-23 Identities = 162/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| ||||| || ||||| || ||||||||||| | ||| | Sbjct 861 AGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGG 920 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| || || |||| ||||||||||| || || || || || Sbjct 921 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCC 980 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || ||||| || ||||| |||| || | || |||||||| || Sbjct 981 TTGTCCTGGATCTTCTGCTTGACATTGT-CAATGCTGTCCGAAGGCTCGACGTCGAGCGT 1039 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || ||||| | ||| || ||||| || ||||| || Sbjct 1040 GATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATCTT 1081 >seq58 Length=197190 Score = 123 bits (136), Expect = 3e-23 Identities = 162/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| ||||| || ||||| || ||||||||||| | ||| | Sbjct 84945 AGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGG 85004 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| || || |||| ||||||||||| || || || || || Sbjct 85005 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCC 85064 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || ||||| || ||||| |||| || | || |||||||| || Sbjct 85065 TTGTCCTGGATCTTCTGCTTGACATTGT-CAATGCTGTCCGAAGGCTCGACGTCGAGCGT 85123 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || ||||| | ||| || ||||| || ||||| || Sbjct 85124 GATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATCTT 85165 >seq150 Length=112013 Score = 120 bits (132), Expect = 3e-22 Identities = 163/225 (72%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTG 134554 || |||| ||| ||||| ||||| || ||||| || |||||||||| || || | ||| | Sbjct 82387 AGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGACAGC-GTGCG 82445 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || ||||| ||||| || || |||| ||||||||| || ||||| ||||| || Sbjct 82446 GCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTC 82505 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || ||||| || || || || ||| | | ||| |||| || || ||||| || Sbjct 82506 CTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCCGACGGCTCGACATCGAGTGT 82565 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTT 134719 || || || || || | || || || || || ||||| ||||| Sbjct 82566 GATCGTCTTGCCCGTCAGCGTCTTCACAAAGATCTGCATCTTGTT 82610 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTG 134554 || |||| ||| ||||| ||||| || ||||| || |||||||||| || || | ||| | Sbjct 90884 AGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGACAGC-GTGCG 90826 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || ||||| ||||| || || |||| ||||||||| || ||||| ||||| || Sbjct 90825 GCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTC 90766 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || ||||| || || || || ||| | | ||| |||| || ||||| || || Sbjct 90765 CTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCCGACGGCTCGACGTCAAGCGT 90706 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGT 134724 || || || || || | || || || || || ||||| ||| | ||| Sbjct 90705 GATCGTCTTGCCCGTCAGCGTCTTCACAAAGATCTGCATGGTGTGTGTGT 90656 >seq575 Length=11535 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTG 134554 || |||| ||| ||||| ||||| || ||||| || |||||||||| || || | ||| | Sbjct 2006 AGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGACAGC-GTGCG 1948 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || ||||| ||||| || || |||| ||||||||| || ||||| ||||| || Sbjct 1947 GCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTC 1888 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || ||||| || || || || ||| | | ||| |||| || ||||| || || Sbjct 1887 CTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCCGACGGCTCGACGTCAAGCGT 1828 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGT 134724 || || || || || | || || || || || ||||| ||| | ||| Sbjct 1827 GATCGTCTTGCCCGTCAGCGTCTTCACAAAGATCTGCATGGTGTGTGTGT 1778 >seq378 Length=32279 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTG 134554 || |||| ||| ||||| ||||| || ||||| || |||||||||| || || | ||| | Sbjct 160 AGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGACAGC-GTGCG 102 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || ||||| ||||| || || |||| ||||||||| || ||||| ||||| || Sbjct 101 GCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTC 42 Query 134615 TTTTTCTTGAATTTTTTGTTTGAC 134638 || || ||||| || || || || Sbjct 41 CTTGTCCTGAATCTTCTGCTTCAC 18 >seq43 Length=242114 Score = 86.0 bits (94), Expect = 6e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| ||||| || ||||| || ||||||||||| || ||| | Sbjct 82748 AGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGG 82807 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCT 134612 ||| |||||||| ||||| || || |||| ||||||||||| || || || ||| Sbjct 82808 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCT 82864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505390869563840