Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq575 89.7 3e-13 seq150 89.7 3e-13 >seq575 Length=11535 Score = 89.7 bits (98), Expect = 3e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||||| || || || |||||| || ||||| || || || || || || Sbjct 2006 AGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGG 1947 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || || || || | |||||| ||||||||||| | |||||| Sbjct 1946 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCC 1887 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||||| || || ||| | || | ||| ||| || || | || Sbjct 1886 TTGTCCTGAATCTTCTG-CTTCACGTTGTCGATCGAGTCCGACGGCTCGACGTCAAGCGT 1828 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGTATG 34718 ||||| || || || | ||| |||||||| ||||||||| || ||| || Sbjct 1827 GATCGTCTTGCCCGTCAGCGTCTTCACAAAGATCTGCATGGTGTGTGTGTG 1777 >seq150 Length=112013 Score = 89.7 bits (98), Expect = 3e-13 Identities = 159/228 (70%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||||| || || || |||||| || ||||| || || || || || || Sbjct 82387 AGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGG 82446 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || || || || | |||||| ||||||||||| | |||||| Sbjct 82447 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCC 82506 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||||| || || ||| | || | ||| ||| || || | || Sbjct 82507 TTGTCCTGAATCTTCTG-CTTCACGTTGTCGATCGAGTCCGACGGCTCGACATCGAGTGT 82565 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGT 34715 ||||| || || || | ||| |||||||| |||||||| ||| |||| Sbjct 82566 GATCGTCTTGCCCGTCAGCGTCTTCACAAAGATCTGCATCTTG-TTGT 82612 Score = 89.7 bits (98), Expect = 3e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||||| || || || |||||| || ||||| || || || || || || Sbjct 90884 AGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGG 90825 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || || || || | |||||| ||||||||||| | |||||| Sbjct 90824 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCC 90765 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||||| || || ||| | || | ||| ||| || || | || Sbjct 90764 TTGTCCTGAATCTTCTG-CTTCACGTTGTCGATCGAGTCCGACGGCTCGACGTCAAGCGT 90706 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGTATG 34718 ||||| || || || | ||| |||||||| ||||||||| || ||| || Sbjct 90705 GATCGTCTTGCCCGTCAGCGTCTTCACAAAGATCTGCATGGTGTGTGTGTG 90655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725027765736