Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_029079.1 Length=75339 Score E Sequences producing significant alignments: (Bits) Value seq209 167 1e-36 >seq209 Length=86076 Score = 167 bits (184), Expect = 1e-36 Identities = 340/499 (68%), Gaps = 21/499 (4%) Strand=Plus/Plus Query 66248 CATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGA 66307 ||||||||| |||||| || | ||| | | ||||||||| |||||| || || |||| Sbjct 80657 CATCGACGCCGAGCACGCCATCGACGCGCACTACGCCAAGCAGCTCGGCGTCAACATCGA 80716 Query 66308 CAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCT 66367 | | ||| | ||||| ||| | ||||||||||| || ||||||| ||| || Sbjct 80717 CGAGCTCTACATCTCGCAGCCCGACTCGGGCGAGCAGGCGCTCGAGATCGCCGACACGCT 80776 Query 66368 CGTCAAGTCTGGCGAGCTGTCCA--TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCG 66425 || || |||| | ||| | |||||||||| ||| || || || || |||||| Sbjct 80777 TGTGCGATCAGGCG--CCGTCGACGTCGTCGTCGTCGACAGCGTCGCTGCGCTAGTGCCG 80834 Query 66426 CGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATG 66485 || |||||||| |||||||| || || ||| || ||| |||| ||||| |||||| Sbjct 80835 CGAGCCGAGCTGGAAGGCGAGATGGGCGACCAGCAGATCGCGTTGCAGGCGCGGCTCATG 80894 Query 66486 TCGCAGGCCATGCGCAAGCTCACCGGCACCATCTC-CAGCA---CCAA---CACGCTGAC 66538 ||||| ||||||||||||| || ||| | |||| |||| || ||| | Sbjct 80895 AGCCAGGCGCTGCGCAAGCTCACGGG----ATCGCTGAGCAAATCCAACTGCATGCTCA- 80949 Query 66539 GCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGAC 66598 ||| | |||||| | ||| |||| | || | | | || || || |||| Sbjct 80950 --TCTTCCTGAACCAGATCCGCCAGAAAGTGGGTATCCT---CTTTGGTTCGCCCGAGGT 81004 Query 66599 CACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCAT 66658 ||| ||||||||| ||| || | | |||||| || || || | || | || |||| Sbjct 81005 CACGTCGGGCGGCACGGCGCTGCGCTACTACGCGTCCGTGCGGCTCGACATTCGGCGCAA 81064 Query 66659 CGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAA 66718 ||| | ||||||||||| ||| || |||||| | | || ||||||| ||| Sbjct 81065 GGCCGCGATCAAGGAAGGCGACAAGGTCGTAGGCAACGAGATCGTCGTCAAGGTCGCCAA 81124 Query 66719 GAACAAGCTGGCCCCGCCG 66737 ||||||||| || ||||| Sbjct 81125 GAACAAGCTCGCGTCGCCG 81143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240956499453600