Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq247 176 4e-39 >seq247 Length=71432 Score = 176 bits (194), Expect = 4e-39 Identities = 382/573 (67%), Gaps = 2/573 (0%) Strand=Plus/Plus Query 34220 TTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGG 34279 || || ||||||||||| || || || | |||| ||||| | || |||||| ||||| Sbjct 59201 TTCCCNCTGCTGACGACNAANCGCGTATTCTGGCGCGGCGTCGCGGAAGAGCTGTTGTGG 59260 Query 34280 TTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGAC 34339 ||| | || || | ||| ||| ||||| | | | | ||| | | || ||||| Sbjct 59261 TTCATCAGTGGCGACACAAACGCCAAGACGTTGCAGGACAAGGGCATCCACATTTGGGAT 59320 Query 34340 GCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATC-TCGGGAGGAGGGCGA 34398 | | || || || | ||||| | || ||| | | ||| || | ||||| Sbjct 59321 GGNAATGGATCCAAGGAATACCTGGANA-GCATCGGTCTCGGNCATCGTGAAGCTGGCGA 59379 Query 34399 CTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGA 34458 | || || || || || ||||| ||| | |||||||| || |||| | | | Sbjct 59380 TCTCGGACCAGTGTATGGCTTCCANTGGCGCCACTTTGGTGCCAAGTACACGACCATGCA 59439 Query 34459 AGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCG 34518 || || || || || ||||||| |||||||| | | || || ||| | ||| Sbjct 59440 CGCCGANTACTCNGGCCAGGGAGTCGACCAGCTNGCGGAGGTCATTCACAAGCTCAAGAC 59499 Query 34519 GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGAT 34578 |||||| | || | | ||| | |||| || |||||||| ||||||| ||| Sbjct 59500 GAACCCAAACGATCGTCGCATCATCATGTCGGCATGGAACCCTGCGGATCTCAAGGAGAT 59559 Query 34579 GGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTG 34638 |||||| || ||||| |||| ||||||| ||||||||||| || || ||||| || || Sbjct 59560 GGCGCTGCCGCCGTGTCACATGTTCTGCCAGTTCTACGTCGCCAACGGCGAGCTNTCGTG 59619 Query 34639 CCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTA 34698 ||| | || || || || | |||||||| | || ||||| || |||||||| || || Sbjct 59620 NCAGATGTACCAGCGCTCAGCTGACATGGGACTCGGCGTGCCTTTTAACATTGCGAGCTA 59679 Query 34699 CGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCA 34758 ||| ||| | || | ||||| || ||| ||| || | |||| || | | || Sbjct 59680 CGCGCTGTTGACTCGACTCATCGCGCAGGTCACAGGGCTGCGTGCTGGAGACTTCATCCA 59739 Query 34759 TACGTTGGGGGATGCGCATATCTACCTGAACCA 34791 ||| | || |||||||| |||||| ||||||| Sbjct 59740 CACGATCGGCGATGCGCACATCTACTTGAACCA 59772 Score = 176 bits (194), Expect = 4e-39 Identities = 382/573 (67%), Gaps = 2/573 (0%) Strand=Plus/Minus Query 6554 TGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCC 6613 ||||||| |||||| |||||||| || | ||| || | | || |||| | || ||| Sbjct 59772 TGGTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCT 59713 Query 6614 ACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCT 6673 ||| || ||||| | || | ||| ||||| || |||||||| || ||||| || Sbjct 59712 GTGACCTGCGCGATGAGTCGAGTCAACAGCGCGTAGCTCGCAATGTTAAAAGGCACGCCG 59653 Query 6674 AACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAG 6733 | |||||||| | || || || || | ||| || || ||||| || || ||||||||| Sbjct 59652 AGTCCCATGTCAGCTGAGCGCTGGTACATCTGNCACGANAGCTCGCCGTTGGCGACGTAG 59593 Query 6734 AATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCAC 6793 || ||||||| |||| ||||| || ||||||||| ||||||| |||||||| Sbjct 59592 AACTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGATCCGCAGGGTTCCAT 59533 Query 6794 GCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGC 6853 || |||| | ||| | | || | |||||| ||| | ||| || || | | Sbjct 59532 GCCGACATGATGATGCGACGATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGCN 59473 Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAG 6913 |||||||| ||||||| || || || || || | | | |||| || |||||| Sbjct 59472 AGCTGGTCGACTCCCTGGCCNGAGTANTCGGCGTGCATGGTCGTGTACTTGGCACCAAAG 59413 Query 6914 TGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA-GATGGGAACCC 6972 || | ||| ||||| || || || || || | ||||| | || ||| | | ||| Sbjct 59412 TGGCGCCANTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGNCCGAGACCG 59353 Query 6973 CCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGA 7032 || | ||||| | || || || | | ||||| || | | ||| | | Sbjct 59352 ATGC-TNTCCAGGTATTCCTTGGATCCATTNCCATCCCAAATGTGGATGCCCTTGTCCTG 59294 Query 7033 GAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTT 7092 | | ||||| ||| ||| | || || | |||||||| |||||| || | ||||| Sbjct 59293 CAACGTCTTGGCGTTTGTGTCGCCACTGATGAACCACAACAGCTCTTCCGCGACGCCGCG 59234 Query 7093 CCAGTACACACGTTTCGTCGTCAGCAGCGGAAA 7125 |||| | || || || ||||||||||| || || Sbjct 59233 CCAGAATACGCGNTTNGTCGTCAGCAGNGGGAA 59201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448255720890240