Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq247 154 1e-32 seq83 82.4 6e-11 >seq247 Length=71432 Score = 154 bits (170), Expect = 1e-32 Identities = 392/606 (65%), Gaps = 7/606 (1%) Strand=Plus/Minus Query 29634 CGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGT 29693 ||||||||| | | ||||||||||| |||| | ||||| ||| ||||| || | |||| Sbjct 59798 CGAGCTGAACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGT 59739 Query 29694 GGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGT 29753 ||| || ||||| | ||||| ||||| || || || | || | || | || Sbjct 59738 GGATGAAGTCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCAACAGCGCGT 59679 Query 29754 AGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGC 29813 |||| || |||||||| ||||| ||||| |||||||| |||| | |||||| | ||| | Sbjct 59678 AGCTCGCAATGTTAAAAGGCACGCCGAGTCCCATGTCAGCTGAGCGCTGGTACATCTGNC 59619 Query 29814 ACGAGAGCTCTCCGTCGCTCACGTAAAACTGAC---ACATGGCATGGCACGGAGGAAGGG 29870 |||| ||||| |||| | ||||| ||||| | ||||| || ||||| || || | Sbjct 59618 ACGANAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATG---TGACACGGCGGCAGCG 59562 Query 29871 CCATGAGACCCAAGTCTTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGT 29930 |||| | || |||||||| || ||| ||||||||| | || | ||||| Sbjct 59561 CCATCTCCTTGAGATCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCGTTTGGGT 59502 Query 29931 TGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTG 29990 | || ||| || | | | | ||||| || || ||| || ||||| || | Sbjct 59501 TCGTCTTGAGCTTGTGAATGACCTCCGCNAGCTGGTCGACTCCCTGGCCNGAGTANTCGG 59442 Query 29991 NNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCA 30050 | || || | ||| ||||| || ||||| ||||| | Sbjct 59441 CGTGCATGGTCGTGTACTTGGCACCAAAGTGGCGCCANTGGAAGCCATACACTGGTCCGA 59382 Query 30051 GGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGG 30110 | || || |||| | || ||| || | | |||| | || |||| || || Sbjct 59381 GATCGCCAGCTTCACGATGNCCGAGACCGATGCTNTCCAGGTATTCCTTGGATCCATTNC 59322 Query 30111 CGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGA 30170 | ||||| || | | ||||| || | | |||| ||||||| || |||| || Sbjct 59321 CATCCCAAATGTGGATGCCCTTGTCCTGCAACGTCTTGGCGTTTGTGTCGCCACTGATGA 59262 Query 30171 ACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAG-GGGA 30229 |||||| |||||| ||| ||||| | ||| || || | || ||||| || || |||| Sbjct 59261 ACCACAACAGCTCTTCCGCGACGCCGCGCCAGAATACGCGNTTNGTCGTCAGCAGNGGGA 59202 Query 30230 AACTGT 30235 | ||| Sbjct 59201 ANATGT 59196 >seq83 Length=171706 Score = 82.4 bits (90), Expect = 6e-11 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 53525 CCAGAGATGGGCGACAAGTTT-GCATCCTTCACGGCGCAAAAGGGGACATGCGGAGCGGT 53583 || ||||| ||||||||||| ||| | |||||| || ||||| ||||| || | Sbjct 125262 CCCGAGATCGGCGACAAGTTCAGCAGTCGCCACGGC-CAGAAGGGCGTGTGCGGCACGAT 125320 Query 53584 CCTGACTCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCC-GACCTCATCATCA 53642 || | |||||||||||||| ||| || | ||||| || |||||| ||||| ||||| | Sbjct 125321 CCGCAACCAGGAGGACATGCCGTTCAACGACGACGGCGT-GTGCCCGGACCTGATCATGA 125379 Query 53643 ACCCCCACGCCTTTCCCTCCAGGATGACGGT 53673 |||| |||| || || | | |||||||| Sbjct 125380 ACCCGCACGGTTTCCCGAGCCGCATGACGGT 125410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406157299464112