Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq247 185 6e-42 >seq247 Length=71432 Score = 185 bits (204), Expect = 6e-42 Identities = 401/603 (67%), Gaps = 1/603 (0%) Strand=Plus/Minus Query 27128 CGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGT 27187 |||||||| ||| ||||||||||| || | || ||||| ||| || || || | |||| Sbjct 59798 CGAGCTGAACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGT 59739 Query 27188 GGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGT 27247 ||| || ||||| | ||||| ||||| || || || | || | || | || Sbjct 59738 GGATGAAGTCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCAACAGCGCGT 59679 Query 27248 AGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGAC 27307 |||| || |||||||| || || ||||| |||||||| | || | |||||| | ||| | Sbjct 59678 AGCTCGCAATGTTAAAAGGCACGCCGAGTCCCATGTCAGCTGAGCGCTGGTACATCTGNC 59619 Query 27308 ACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCA 27367 |||| ||||| || | | ||||| ||||| || | ||| ||||| || || |||| Sbjct 59618 ACGANAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATGTGACACGGCGGCAGCGCCA 59559 Query 27368 TGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGT 27427 | | || |||||||| || ||| ||||||||| | || | |||||| Sbjct 59558 TCTCCTTGAGATCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCGTTTGGGTTCG 59499 Query 27428 TCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCC 27487 || ||| || | | | | ||||| || || ||| || ||||| || | Sbjct 59498 TCTTGAGCTTGTGAATGACCTCCGCNAGCTGGTCGACTCCCTGGCCNGAGTANTCGGCGT 59439 Query 27488 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGT 27547 |||| |||||||| || || || || | ||| ||||| || ||||| ||||| || | Sbjct 59438 GCATGGTCGTGTACTTGGCACCAAAGTGGCGCCANTGGAAGCCATACACTGGTCCGAGAT 59379 Query 27548 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 | || |||| | || ||| || | | |||| | || |||| || || | | Sbjct 59378 CGCCAGCTTCACGATGNCCGAGACCGATGCTNTCCAGGTATTCCTTGGATCCATTNCCAT 59319 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 27667 |||| || | | ||||| || | | |||| ||||||| || |||| ||||| Sbjct 59318 CCCAAATGTGGATGCCCTTGTCCTGCAACGTCTTGGCGTTTGTGTCGCCACTGATGAACC 59259 Query 27668 ACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAG-GGGAAAC 27726 ||| |||||| ||| ||||| | ||| || || | || ||||| || || ||||| Sbjct 59258 ACAACAGCTCTTCCGCGACGCCGCGCCAGAATACGCGNTTNGTCGTCAGCAGNGGGAANA 59199 Query 27727 TGT 27729 ||| Sbjct 59198 TGT 59196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369501831984152