Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq125 109 2e-19 seq44 102 3e-17 >seq125 Length=134489 Score = 109 bits (120), Expect = 2e-19 Identities = 189/273 (69%), Gaps = 4/273 (1%) Strand=Plus/Minus Query 31005 CCATGCACATGTGTCGCGCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGA 31064 ||||||||||||| ||||| ||||| || | ||||| | || | | | | | Sbjct 117596 CCATGCACATGTGCGTCGCCTCGATGACGACGGCCACGCCTTGGGGCTGGATGACGCCCA 117537 Query 31065 ACAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCG--GCGAGCATA 31122 | ||||| ||||||||| | || || || |||||||||||||| || ||||| | | Sbjct 117536 TGATTGCGTTCGCGATCTGCTTCGTCAGTCGCTCCTGCACTTGCAGTCGTCGCGAGAAGA 117477 Query 31123 CATGTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCT 31182 | | | | | ||| | ||||||||||| || | | |||||||| ||||||| Sbjct 117476 CCTCTGAG--ATGCGCGCGAGCTTGCTCAGACCGAGCACCTTGCCGTTCGGGATGTAGCC 117419 Query 31183 GATCGTGACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGAT 31242 || |||| |||||| || |||| | | |||||||||||| | ||||| | || Sbjct 117418 AATGTGGACCTTGCCGATGAACGGCACCATGTGATGCTCGCACAGCGAGTACAGATCAAT 117359 Query 31243 GTCGCGCACCGTCACCATCTGGTCATGCTTCTC 31275 |||||| || | ||||||| ||| || | ||| Sbjct 117358 GTCGCGGACGATGACCATCTCGTCGTGGTCCTC 117326 >seq44 Length=241148 Score = 102 bits (112), Expect = 3e-17 Identities = 149/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 31069 TGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCG--GCGAGCATACATG 31126 ||||| ||||||||| | || || || |||||||||||||| || ||||| | || | Sbjct 1547 TGCGTTCGCGATCTGCTTCGTCAGTCGCTCCTGCACTTGCAGTCGTCGCGAGAAGACCTC 1488 Query 31127 TCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCTGATC 31186 | | | ||| | ||||||||||| || | | |||||||| ||||||| || Sbjct 1487 TGAG--ATGCGCGCGAGCTTGCTCAGACCGAGCACCTTGCCGTTCGGGATGTAGCCAATG 1430 Query 31187 GTGACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGATGTCG 31246 |||| |||||| || |||| | | |||||||||||| | ||||| | |||||| Sbjct 1429 TGGACCTTGCCGATGAACGGCACCATGTGATGCTCGCACAGCGAGTACAGATCAATGTCG 1370 Query 31247 CGCACCGTCACCATCTGGTCATGCTTCTC 31275 || || | ||||||| ||| || | ||| Sbjct 1369 CGGACGATGACCATCTCGTCGTGGTCCTC 1341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187286948915712