Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq18 145 8e-30 >seq18 Length=85926 Score = 145 bits (160), Expect = 8e-30 Identities = 378/567 (67%), Gaps = 16/567 (3%) Strand=Plus/Minus Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 ||| ||| || ||||| ||||| || | ||||| || | ||| ||||| || || | Sbjct 69271 ACAGCAGGCACGCGAAGTCGCAGTGGAGGCCCTCATCACGCGAGATGAGTTCATTCGAGA 69212 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 | | | || ||||| || || ||||| | |||||| |||| | ||| || |||| Sbjct 69211 AGCTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAAAAGATCGAGCAGAAGGATCCAG 69152 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 | ||||| ||||||||||||| ||||| |||| | || || || ||| |||| | Sbjct 69151 AGAAGAAGATACCCTCGACGGCCGCAAAGGCGACAATGCGCTCCGCAAACGCCGCG-CGA 69093 Query 17136 TGTTA--CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTC 17193 | | || | ||| ||| | |||| | ||| || | || | ||| || || || Sbjct 69092 CGAGAGTCGCA-CCACTTCAGAGCCCAGTGGGCCTTCTTCTGCACACAAGGAATGGTCTC 69034 Query 17194 TATGGC-CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTA 17252 || || | | | | |||| | | | | |||| | || ||||| || ||||| | Sbjct 69033 AATCGCGCGGAGAAGGTGGTTCTTCTCCGTCT-GGTCCTTGATGTACGTGTCAATGAGCA 68975 Query 17253 GGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGG 17312 | ||||| || ||||| |||||||| ||||| ||||| || ||||| ||||| || | Sbjct 68974 GCGAGTACACCTCCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGTG 68915 Query 17313 CTTCCGCTATTTGAACTTCCACGTAGAATCGTTC--CGCTAGATTTTCGTTCACGATGCC 17370 | || | | || || || | ||| |||| || || |||||||| || ||||| Sbjct 68914 CCTCAGGGACCTGCACCTCGCTGCTGAA--GTTCATGGCGAGGTTTTCGTTGACAATGCC 68857 Query 17371 GTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATA---TTTTTCGTCCGGTGT 17427 ||| || ||||| |||||||| | | |||||| |||||||| | | |||| || Sbjct 68856 GTCACTGGCGGCAAAAAACGCGAGCACATGCTTGATGAAATAGCGCTCATTGTCC---GT 68800 Query 17428 AAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACT 17487 || | ||||||||| | || | | ||| | || |||| ||||| || || Sbjct 68799 GAGGTTGTTCCAGTCCTTGAGGTCGTGCACCAGATCAATCTCCTCGGCCGTCCAGAAGCT 68740 Query 17488 AGCCACTGCCTTTTTATACATATTCCA 17514 ||| | ||||| || ||||| | ||| Sbjct 68739 CGCCTCGGCCTTCTTGTACATCTGCCA 68713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517433829558360