Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq18 102 8e-17 >seq18 Length=85926 Score = 102 bits (112), Expect = 8e-17 Identities = 381/586 (65%), Gaps = 16/586 (3%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || |||||||||||||| || || || || || | ||| ||||| || || || | Sbjct 69266 AGGCACGCGAAGTCGCAGTGGAGGCCCTCATCACGCGAGATGAGTTCATTCGAGAAGCTG 69207 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317 | || ||||| || || ||||| | ||| || |||| |||| || || || || || Sbjct 69206 AGGCCAGGCATGAGACCACGCTTCTTGAGCCAAAAGATCG-AGCAGAAGGATCCAGAGAA 69148 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCAT--CTTTA 16375 ||| |||||||| || | ||||| |||| | || ||||| ||| || | | Sbjct 69147 GAAGATACCCTCGACGGCCGCAAAGGCGACAATGCGCTCCGCAAACGCCGCGCGACGAGA 69088 Query 16376 TTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATG 16435 | || | ||| ||| | |||| | ||| || | | | |||| || || || || Sbjct 69087 GT-CGCA-CCACTTCAGAGCCCAGTGGGCCTTCTTCTGCACACAAGGAATGGTCTCAATC 69030 Query 16436 GC-CTTAAACAATTTCTCTTTTTC--CTGAATATCGATTATATACGTATCAATCAGTAAA 16492 || | | | | |||| | | ||| || | || ||||| ||||| || | Sbjct 69029 GCGCGGAGAAGGTGGTTCTTCTCCGTCTGG---TCCTTGATGTACGTGTCAATGAGCAGC 68973 Query 16493 CTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCC 16552 ||||| || ||||| |||||||| ||||| ||||| || || |||||||| || ||| Sbjct 68972 GAGTACACCTCCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGTGCC 68913 Query 16553 TCCGCTATTTGTACTTCCACGTAAAATCGTTCC--GCCAGGTTCTCATTCACGATACCGT 16610 || | | || || || | || |||| || ||||| || || || || |||| Sbjct 68912 TCAGGGACCTGCACCTCGCTGCTGAA--GTTCATGGCGAGGTTTTCGTTGACAATGCCGT 68855 Query 16611 CACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAA 16670 |||| || ||||||||||| | | ||||| |||||||| || | || || Sbjct 68854 CACTGGCGGCAAAAAACGCGAGCACATGCTTGATGAAATAGCGCTCATTGTCCGTGAGGT 68795 Query 16671 TATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCA 16730 | | ||| || || | || | | ||| | || || | |||||| ||||| ||| Sbjct 68794 TGTTCCAGTCCTTGAGGTCGTGCACCAGATCAATCTCCTCGGCCGTCCAGAAGCTCGCCT 68735 Query 16731 CTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776 | ||||| || ||||| | ||| | || || | || || ||||| Sbjct 68734 CGGCCTTCTTGTACATCTGCCACACCTCGTTCTCCTGAATCGGAAA 68689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511303953667640