Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq5268 104 2e-17 seq757 98.7 8e-16 >seq5268 Length=2107 Score = 104 bits (114), Expect = 2e-17 Identities = 174/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| ||| || || || |||| ||| || ||||||||||| || ||||||| |||| Sbjct 330 ATGGCACTGCCCCCCTGCCACATGTTCTGCCAGTTTTACGTCGCGGACGGTGAGCTATCG 271 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 |||||| | || ||| | || | || ||||| || || || || |||||||| || | Sbjct 270 TGCCAAATGTATCAGCGCTCAGCCGACATGGGGCTCGGCGTGCCCTTCAACATCGCGAGC 211 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATT 19151 || ||||| | || | | ||||| ||||||||||| | || || || ||| Sbjct 210 TACGCACTCTTGACGCGGCTGATCGCGCAGGTTACAGGACTCCGGGCGGGTGACTTCATT 151 Query 19152 CATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGCTA 19211 || || || || || || || ||||| || | ||| | || | | || || |||||| Sbjct 150 CACACCATTGGCGACGCTCACATTTATCTGGACCATGTCGAACCCCTCAAGGTTCAGCTA 91 Query 19212 GCTCGATCCCCA 19223 | || ||||| Sbjct 90 GGGCGCACCCCA 79 >seq757 Length=19743 Score = 98.7 bits (108), Expect = 8e-16 Identities = 173/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| ||| || || ||||||| ||| || ||||||||||| || ||||||| | || Sbjct 19216 ATGGCACTGCCCCCCTGTCACATGTTCTGCCAGTTTTACGTCGCGGACGGTGAGCTGTCT 19275 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | || ||| | || | || ||||| || || || || |||||||| || | Sbjct 19276 TGCCAGATGTATCAGCGCTCAGCCGACATGGGTCTCGGTGTGCCCTTCAACATCGCGAGC 19335 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATT 19151 || || || | || | | ||||| |||||||| || | || || || ||| Sbjct 19336 TACGCGCTCTTGACGCGGCTGATCGCGCAGGTTACAGGGCTGCGGGCGGGTGACTTCATT 19395 Query 19152 CATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGCTA 19211 || || || || || || || |||||| || ||||| | || | | || || |||||| Sbjct 19396 CACACCATTGGCGACGCTCACATTTACCTGGATCATGTCGAGCCCCTCAAGGTCCAGCTA 19455 Query 19212 GCTCGATCCCCA 19223 | || ||||| Sbjct 19456 GGGCGCACCCCA 19467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399419879064465