Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq5268 210 3e-49 seq757 208 9e-49 >seq5268 Length=2107 Score = 210 bits (232), Expect = 3e-49 Identities = 411/600 (69%), Gaps = 8/600 (1%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| | ||| ||||| || || |||| || || | ||| ||||| || | | ||| Sbjct 92 AGCTGAACCTTGAGGGGTTCGACATGGTCCAGATAAATGTGAGCGTCGCCAATGGTGTGA 151 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 |||||||| || | | ||| || || | || |||| || |||| || | |||| Sbjct 152 ATGAAGTCACCCGCCCGGAGTCCTGTAACCTGCGCGATCAGCCGCGTCAAGAGTGCGTAG 211 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || || |||||||||||||| || ||||||||||| | |||||||| |||| ||||| Sbjct 212 CTCGCGATGTTGAAGGGCACGCCGAGCCCCATGTCGGCTGAGCGCTGATACATTTGGCAC 271 Query 145852 GAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 || ||||| ||| |||| ||||| |||||||| | | ||||||||| ||||| ||||| Sbjct 272 GATAGCTCACCGTCCGCGACGTAAAACTGGCAGAACATGTGGCAGGGGGGCAGTGCCATC 331 Query 145912 GCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTC 145971 | || || ||||||||||| || | | || | | | | | || ||| || Sbjct 332 TCCTTAAGATCGGCCGGGTTCCATGCTGACATGATTATGCGACGGTCGTTCGGATTCGTC 391 Query 145972 TTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTG 146031 || | || |||| || |||||||| |||||||| || ||| || | | || Sbjct 392 TTCAGCTTATGAATCACCTCTGCAAGCTGGTCGACGCCCTGGCCGGTGTAGTC-GGCGTG 450 Query 146032 GA--GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGT 146089 | || | |||| || |||||||| | ||||||||| ||||| || || || |||| Sbjct 451 CATCGT-CGTGTACTTTGCGCCGAAGTGGCGCCACTGGAAACCGTACACCGGTCCGAGGT 509 Query 146090 CCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGT 146149 | |||| || | || || || || | |||| | ||| ||||| ||| | | Sbjct 510 CTCCGGCTTCACGATGACCGAGACCAATGCTTTCGAGATATTCCTTTGACCCATTGCCAT 569 Query 146150 CCCAGATCTTGACGCCC--CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAA 146207 ||||||| |||| |||| || | || | || |||| || ||| || |||||||| Sbjct 570 CCCAGATTTTGATGCCCTTGTCCTGCAG-GGTC-TTGGCGTTGGTGTCACCACTGATGAA 627 Query 146208 CCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 ||| | |||||| || || || | |||||| || | ||||| || || || || || Sbjct 628 CCACAACAGCTCCTCTGCAACGCCGCGCCAGAACACGCGTTTGGTCGTTAGAAGTGGAAA 687 >seq757 Length=19743 Score = 208 bits (230), Expect = 9e-49 Identities = 407/598 (68%), Gaps = 4/598 (1%) Strand=Plus/Minus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||||| ||| |||||||| || || | ||||| | ||| ||||| || | | ||| Sbjct 19454 AGCTGGACCTTGAGGGGCTCGACATGATCCAGGTAAATGTGAGCGTCGCCAATGGTGTGA 19395 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 |||||||| || | | || || || | || |||| || |||| || | |||| Sbjct 19394 ATGAAGTCACCCGCCCGCAGCCCTGTAACCTGCGCGATCAGCCGCGTCAAGAGCGCGTAG 19335 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || || |||||||||||||| || || |||||||| | |||||||| |||| |||||| Sbjct 19334 CTCGCGATGTTGAAGGGCACACCGAGACCCATGTCGGCTGAGCGCTGATACATCTGGCAA 19275 Query 145852 GAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 || ||||| ||| |||| ||||| |||||||| | | ||| ||||| ||||| ||||| Sbjct 19274 GACAGCTCACCGTCCGCGACGTAAAACTGGCAGAACATGTGACAGGGGGGCAGTGCCATC 19215 Query 145912 GCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTC 145971 | || || ||||||||||| || | | || | | | | | || ||| || Sbjct 19214 TCCTTGAGATCGGCCGGGTTCCATGCTGACATGATTATGCGACGGTCGTTCGGATTCGTC 19155 Query 145972 TTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTG 146031 || | | |||| || |||||||| |||||||| ||| ||| || | | || Sbjct 19154 TTCAGTTTGAGAATCACCTCGGCAAGCTGGTCGACGCCCTGACCCGTGTAGTC-GGCGTG 19096 Query 146032 GA--GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGT 146089 | || | |||| || |||||||| | ||||||||| ||||| || || || |||| Sbjct 19095 CATCGT-CGTGTACTTTGCGCCGAAGTGGCGCCACTGGAAGCCGTACACCGGTCCGAGGT 19037 Query 146090 CCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGT 146149 | |||| || | || || || || | |||| | ||| ||||| ||| | | Sbjct 19036 CTCCGGCTTCACGATGACCGAGACCAATGCTTTCGAGATATTCCTTTGACCCATTGCCAT 18977 Query 146150 CCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACC 146209 ||||||| |||| |||| | | ||| |||| || ||| || |||||||||| Sbjct 18976 CCCAGATTTTGATGCCCTTGTCCTGCAGCGTCTTGGCGTTGGTGTCACCACTGATGAACC 18917 Query 146210 AGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 | | ||| || || || || | |||||| || | ||||| || || || || || Sbjct 18916 ACAACAGTTCCTCTGCAACACCGCGCCAGAACACGCGTTTGGTCGTAAGAAGTGGAAA 18859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589949365539080