Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq5268 107 2e-18 >seq5268 Length=2107 Score = 107 bits (118), Expect = 2e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 20401 ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCG 20460 ||||| |||| || || || ||| | ||||| |||||||| || | ||| | ||| Sbjct 330 ATGGCACTGCCCCCCTGCCACATGTTCTGCCAGTTTTACGTCGCGGACGGTGAGCTATCG 271 Query 20461 TGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGT 20520 || ||||||||||| || || || || ||||| || || || || ||||| || || || Sbjct 270 TGCCAAATGTATCAGCGCTCAGCCGACATGGGGCTCGGCGTGCCCTTCAACATCGCGAGC 211 Query 20521 TATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTC 20580 || || || | ||| |||| || || ||||||| | |||||||||| | Sbjct 210 TACGCACTCTTGACGCGGCTGATCGCGCAGGTTACAGGACTCCGGGCGGGTGACTTCATT 151 Query 20581 CACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACC 20624 |||||||| || ||||| || ||||| || | ||| | ||||| Sbjct 150 CACACCATTGGCGACGCTCACATTTATCTGGACCATGTCGAACC 107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399099946444765