Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq757 158 2e-33 seq26 154 2e-32 seq5268 134 2e-26 seq18 127 3e-24 seq683 114 2e-20 seq14 111 2e-19 seq456 107 3e-18 >seq757 Length=19743 Score = 158 bits (174), Expect = 2e-33 Identities = 298/427 (70%), Gaps = 10/427 (2%) Strand=Plus/Plus Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126 || || || || || |||||||| ||||||||| | |||| ||| | ||||| ||| Sbjct 19033 GGAGACCTCGGACCGGTGTACGGCTTCCAGTGGCGCCACTTCGGCGCAAAGTACAC-GAC 19091 Query 70127 --TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAA-TTGCAGACAATCATTGACACT 70183 ||| | | ||||| |||||||||| || || || |||| || | ||| || Sbjct 19092 GATGCACGCC-GACTACACGGGTCAGGGCGTCGACCAGCTTGCCGAGG-TGATTCTCAAA 19149 Query 70184 CTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTG 70243 || ||||| ||||| | || | | || | |||| ||||||| || || ||| | Sbjct 19150 CTGAAGACGAATCCGAACGACCGTCGCATAATCATGTCAGCATGGAACCCGGCCGATCTC 19209 Query 70244 CACCAAATGGCACTACCACCGTGTCAC-TGTTTGGCTCAGTTTTAC-TCGTACGATGGCA 70301 | | |||||||| || || |||||| |||| || ||||||||| ||| || || Sbjct 19210 AAGGAGATGGCACTGCCCCCCTGTCACATGTTCTGC-CAGTTTTACGTCGCG-GACGGTG 19267 Query 70302 AATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACA 70361 | |||| ||| ||||||||| | ||||||||||| |||||||| ||||| |||| Sbjct 19268 AGCTGTCTTGCCAGATGTATCAGCGCTCAGCCGACATGGGTCTCGGTGTGCCCTTCAACA 19327 Query 70362 TTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACG 70421 | || ||||| | | ||||||| |||| || || |||| || ||| ||| | Sbjct 19328 TCGCGAGCTACGCGCTCTTGACGCGGCTGATCGCGCAGGTTACAGGGCTGCGGGCGGGTG 19387 Query 70422 AGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGG 70481 | ||| | ||||||||||||||||||||| | || | |||| ||||||| | |||| Sbjct 19388 ACTTCATTCACACCATTGGCGACGCTCACATTTACCTGGATCATGTCGAGCCCCTCAAGG 19447 Query 70482 TGCAACT 70488 | || || Sbjct 19448 TCCAGCT 19454 >seq26 Length=77529 Score = 154 bits (170), Expect = 2e-32 Identities = 583/889 (66%), Gaps = 52/889 (6%) Strand=Plus/Minus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCT-GTC 125080 ||| | |||||||| ||||| |||| ||| ||||| | ||||||| ||||||| || Sbjct 8516 TGGCAGATGTACAAGAAGGCCGAGGCGAGCTTCTGGACTGCCGAAGAGATCGATCTTGTG 8457 Query 125081 CAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCA 125140 || | |||| | || ||| | | | | || || | ||||| | || || ||| Sbjct 8456 CACG-ACCTCAAGGACTGGAACAACC---TCACGGACAACGAGCGCTACTTCATCAAGCA 8401 Query 125141 CATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATT 125200 | | | || |||||||||| | || || || |||||||| || || | || || Sbjct 8400 CGTGCTCGCGTTCTTTGCCGCCAGTGACGGCATTGTCAACGAGAACCTC--GCCATGAAC 8343 Query 125201 CTCTCAAGAGTTGACCA--TTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 || || | | || | || |||| | ||||| ||||| ||||| ||| || Sbjct 8342 TTCAGCAGCGAGGTGCAGGTCCCGGAGGCGCGTTGCTTCTACGGCTTCCAGATCGCCATC 8283 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATC---CG 125315 |||||| | ||||| || |||| || || ||||||| |||||| || | || Sbjct 8282 GAGAACATCCACTCTGAGGTGTATTCGCTGCTCATTGACACGTACATCAAGGACCAGACG 8223 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 | || ||| | ||| ||| || || || | || | | | || ||||| Sbjct 8222 GAGAAGAACCACCTTCTCCG---CGCGATTGAGACCATCCCTTGCGTGCAGAAGAAGGCC 8166 Query 125376 CAATGGGTGATTCGGTGGATCGA-TGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434 || |||| | |||| ||| | || | | | ||| || || | | || || Sbjct 8165 CACTGGGCTCTCAAGTGGTGCGACTCGCGCCGCG-CGGCGTTTGCGGAGCGCATTGTCGC 8107 Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-TAGTTTTGCGGCCATCTTTTGGCTCA 125493 ||||| ||||| |||||||||||||| ||||| | || ||| | ||||| ||||||| Sbjct 8106 CTTCGCGGCCGTCGAGGGCATCTTCTTCTCGGGCTCCTTCTGCT-CGATCTTCTGGCTCA 8048 Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 ||||||| || ||||||||||| || | | |||||| | || || || || |||| Sbjct 8047 AGAAGCGTGGCCTCATGCCCGGCCTCAGCTTCTCGAACGAGCTCATCTCGCGTGATGAGG 7988 Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGT-TTCGCAACT-----ATCTGCGTCCCGAGT 125607 |||| ||||| ||||| || || |||| ||| | || | || |||||||| Sbjct 7987 GCCTCCACTGCGACTTCGCGTGCCTGCTGTACTCGAAGCTCGCCAACAAGCTTCCCGAGT 7928 Query 125608 -GCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAA 125666 || ||||| || || ||||| | | || ||||| ||| || | Sbjct 7927 CGCGCATCCA-CG------AGATCATC--CGT-------GACGCCGTCTCGATTGAGAAG 7884 Query 125667 GAGTTTCTAACCGAATCCCTACCGG-TCAGCATGATTGGCATGAACTGCAAGCTAATGTG 125725 ||||| | || || || |||| | ||| | || |||||||||| || ||||| Sbjct 7883 GAGTTCGTCCAGGACTCGCTCCCGGTTGAGC-TTATCGGCATGAACTCGTCCCTCATGTG 7825 Query 125726 CGAGTACATAGAGTT-TGTGGCAGATCGTCTACTGTACGAG-TTGATTGGCCGCAAGATT 125783 | ||||||| ||||| ||| || || ||||| || ||| | ||| | | |||||| Sbjct 7824 CCAGTACATCGAGTTCTGT-GCGGACCGTCTTCTCCACGCGCTTGGCGTGTC-CAAGATC 7767 Query 125784 TACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAAC 125843 ||||| | | ||| || || |||| ||| || || || || |||| ||||||||| Sbjct 7766 TACAAGGTCTCGAACCCGTTCGATTGGATGGACATGATCTCGCTCCAGGGAAAGACCAAC 7707 Query 125844 TTTTTCGAGAAGAAGGTCAGCGAGTA--CAAACGCTACGGTGTCGGTGT 125890 || ||||||||| || ||||||| | || || |||||||||||| Sbjct 7706 TTCTTCGAGAAGCGTGTGGGCGAGTACTCCAAGGC--CGGTGTCGGTGT 7660 >seq5268 Length=2107 Score = 134 bits (148), Expect = 2e-26 Identities = 293/427 (69%), Gaps = 10/427 (2%) Strand=Plus/Minus Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126 || || || || || |||||||| ||||||||| | |||| ||| | ||||| ||| Sbjct 513 GGAGACCTCGGACCGGTGTACGGTTTCCAGTGGCGCCACTTCGGCGCAAAGTACAC-GAC 455 Query 70127 --TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAA-TTGCAGACAATCATTGACACT 70183 ||| | | ||||| | || ||||| || || || ||||||| | ||| | | Sbjct 454 GATGCACGCC-GACTACACCGGCCAGGGCGTCGACCAGCTTGCAGAGG-TGATTCATAAG 397 Query 70184 CTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTG 70243 || ||||| ||||| | || | | || | |||| ||||||| || || ||| | Sbjct 396 CTGAAGACGAATCCGAACGACCGTCGCATAATCATGTCAGCATGGAACCCGGCCGATCTT 337 Query 70244 CACCAAATGGCACTACCACCGTGTCAC-TGTTTGGCTCAGTTTTAC-TCGTACGATGGCA 70301 | | |||||||| || || || ||| |||| || ||||||||| ||| || || Sbjct 336 AAGGAGATGGCACTGCCCCCCTGCCACATGTTCTGC-CAGTTTTACGTCGCG-GACGGTG 279 Query 70302 AATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACA 70361 | | || ||| |||||||||| | ||||||||||| ||||| || ||||| |||| Sbjct 278 AGCTATCGTGCCAAATGTATCAGCGCTCAGCCGACATGGGGCTCGGCGTGCCCTTCAACA 219 Query 70362 TTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACG 70421 | || ||||| | | ||||||| |||| || || |||| || || ||| | Sbjct 218 TCGCGAGCTACGCACTCTTGACGCGGCTGATCGCGCAGGTTACAGGACTCCGGGCGGGTG 159 Query 70422 AGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGG 70481 | ||| | ||||||||||||||||||||| | ||| | | || |||| || | |||| Sbjct 158 ACTTCATTCACACCATTGGCGACGCTCACATTTATCTGGACCATGTCGAACCCCTCAAGG 99 Query 70482 TGCAACT 70488 | || || Sbjct 98 TTCAGCT 92 >seq18 Length=85926 Score = 127 bits (140), Expect = 3e-24 Identities = 574/888 (65%), Gaps = 50/888 (6%) Strand=Plus/Plus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||| | |||||||| ||||| |||| ||| ||||||| ||| ||| | |||||| Sbjct 68713 TGGCAGATGTACAAGAAGGCCGAGGCGAGCTTCTGGACGGCCGAGGAGATTGATCTGGTG 68772 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 | ||||| | || ||| | | | | || || | |||||| | || || ||| Sbjct 68773 CACGACCTCAAGGACTGGAACAACC---TCACGGACAATGAGCGCTATTTCATCAAGCAT 68829 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTC 125201 | | || || ||||||| | || || || |||||||| || || | || || Sbjct 68830 GTGCTCGCGTTTTTTGCCGCCAGTGACGGCATTGTCAACGAAAACCTC--GCCATGAACT 68887 Query 125202 TCTCAAGAGTTGACCA--TTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTG 125259 || || | | || | || |||| ||||| ||||| ||||| ||| || | Sbjct 68888 TCAGCAGCGAGGTGCAGGTCCCTGAGGCACGCTGCTTCTACGGCTTCCAGATCGCCATCG 68947 Query 125260 AGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATC---CGC 125316 ||||| | |||||||| ||||||| || ||||||| |||||| || | || Sbjct 68948 AGAACATCCACTCGGAGGTGTACTCGCTGCTCATTGACACGTACATCAAGGACCAGACGG 69007 Query 125317 AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTC 125376 | || ||| | ||| ||| || || || | || | | | | || ||||| | Sbjct 69008 AGAAGAACCACCTTCTCCG---CGCGATTGAGACCATTCCTTGTGTGCAGAAGAAGGCCC 69064 Query 125377 AATGGGTGATTCGGTGGATCGA-TGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| | |||| ||| | || | | | ||| || || | | || || Sbjct 69065 ACTGGGCTCTGAAGTGGTGCGACTCTCGTCGCG-CGGCGTTTGCGGAGCGCATTGTCGCC 69123 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-TAGTTTTGCGGCCATCTTTTGGCTCAA 125494 || || ||||| ||||| |||||||| || || | || ||| | |||||||||||||| Sbjct 69124 TTTGCGGCCGTCGAGGGTATCTTCTTCTCTGGATCCTTCTGCT-CGATCTTTTGGCTCAA 69182 Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554 |||||| || |||||||| || || | | || || | || || || || ||||| Sbjct 69183 GAAGCGTGGTCTCATGCCTGGCCTCAGCTTCTCGAATGAACTCATCTCGCGTGATGAGGG 69242 Query 125555 CCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCT-----GCGTCCCGAGT- 125607 ||| ||||| ||||| || || |||| ||| | || | || || |||| Sbjct 69243 CCTCCACTGCGACTTCGCGTGCCTGCTGTACTCGAAGCTTGCCAACAAGCTACCAGAGTC 69302 Query 125608 GCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAG 125667 || ||||| ||| | ||||| | |||||||| ||| || | | Sbjct 69303 GCGCATCCA-CGA------GATCATCCGC---------GATGCCGTCTCGATCGAGAAGG 69346 Query 125668 AGTTTCTAACCGAATCCCTACCGGTC-AGCATGATTGGCATGAACTGCAAGCTAATGTGC 125726 |||| | || || || ||||| ||| |||| |||||||||| || |||||| Sbjct 69347 AGTTCGTTCAGGACTCGCTCCCGGTGGAGC-TGATCGGCATGAACTCGTCCCTCATGTGC 69405 Query 125727 GAGTACATAGAGTT-TGTGGCAGATCGTCTACTGTACGAG-TTGATTGGCCGCAAGATTT 125784 ||||||| ||||| |||| | || ||||| || ||| | ||| | | |||||| | Sbjct 69406 CAGTACATCGAGTTCTGTG-CGGACCGTCTTCTCCACGCGCTTGGCGTGTC-CAAGATCT 69463 Query 125785 ACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACT 125844 |||| | | ||| || || || | ||| || || || || |||| |||||||||| Sbjct 69464 ACAAGGTCTCGAACCCATTCGACTGGATGGACATGATCTCGCTCCAGGGGAAGACCAACT 69523 Query 125845 TTTTCGAGAAGAAGGTCAGCGAGTA--CAAACGCTACGGTGTCGGTGT 125890 | ||||||||| || ||||||| | || || |||||||||||| Sbjct 69524 TCTTCGAGAAGCGTGTGGGCGAGTACTCCAAGGC--CGGTGTCGGTGT 69569 >seq683 Length=21216 Score = 114 bits (126), Expect = 2e-20 Identities = 135/181 (75%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 98040 TACAAGACTGTCTGGGAGATTCCGACCAAGACGC--TGATCGATATGGCTGCCGACAGAG 98097 |||||||| || |||||||| | | ||| | || || | || ||||| |||||| | | Sbjct 18770 TACAAGACCGTGTGGGAGAT--CAAGCAAAAGGCCGTGCTGGACATGGCCGCCGACCGCG 18713 Query 98098 GTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTC 98157 ||| |||||| |||||| || ||| | || || || | ||||| || || ||| Sbjct 18712 GTGCCTACATCTGCCAGAGCCAGTCGCTGAACGTGCACATCGCCGATCCAACGATCAGCA 18653 Query 98158 GTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATC 98217 | || ||||| ||||| ||||||||||| |||||||||||||| ||||||||||| | Sbjct 18652 AGCTCACGTCGATGCACTTCTACGCATGGAAGAAGGGCCTCAAGACCGGCATGTACTACC 18593 Query 98218 T 98218 | Sbjct 18592 T 18592 >seq14 Length=92393 Score = 111 bits (122), Expect = 2e-19 Identities = 217/317 (68%), Gaps = 4/317 (1%) Strand=Plus/Plus Query 127443 GAATCCGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGG 127502 ||| |||||||| ||||| ||||| ||||||||||| |||||||| | ||||||| Sbjct 38908 GAAGCCGTGCGTGAGGTGTCCTCCAGACGGCAGATCGAGGCCCATGATGCGGTCGTGCGG 38967 Query 127503 TTTAACGATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACA 127562 | | || |||||||| |||||||||||| ||| |||||||| || || Sbjct 38968 GCGCAGCAGACCCGTGTACACAGCAAAGTTGGCCGGGCTGCCAGAGTACGGCTGCACGTT 39027 Query 127563 CACTCCCCA-TTCGGACTCGTTCAAAT-TGAACGCTCTGAGACATCGCTGCTGTGCTAGC 127620 || ||||| ||| | | || | | | |||| |||| |||||||| ||| Sbjct 39028 GACGCCCCACTTC--TCGGGGTCCAGTCCGTACGCCTTGAGCGCGCGCTGCTGGCACAGC 39085 Query 127621 AGTTCGATGCGATCGATAAACTCGTTACCACCATAGTATCGCTTTCCGGGCCTACCCTCC 127680 | || || | || || | |||||| || |||||||| |||| ||| ||||| Sbjct 39086 ACCTCAATCTGGTCAATGACCTCGTTGCCGCCATAGTAGCGCTGGTGCGGCAGCCCCTCG 39145 Query 127681 GAGTACTTGTTGATGAGACACGAACTCATGCATTCTCGCACCGGTAGAGTGGTAAAGTTT 127740 | |||||||||| |||| ||||| | || ||| || || | | | ||| ||||| Sbjct 39146 GCGTACTTGTTGGTGAGGCACGAGCCCAGGCACTCCATGACGGCGCGCGAGGTGAAGTTC 39205 Query 127741 TCCGATGCGATCAACTC 127757 || || ||||||| ||| Sbjct 39206 TCGGACGCGATCAGCTC 39222 >seq456 Length=26154 Score = 107 bits (118), Expect = 3e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 98040 TACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGT 98099 |||||||| || |||||||| | ||| | || | || ||||| |||||| | || Sbjct 7345 TACAAGACCGTGTGGGAGATCAAGCAGAAGGCCGTGCTGGACATGGCGGCCGACCGCGGC 7404 Query 98100 GTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGT 98159 | |||||| |||||| || ||| | || || || | |||||||| || ||| Sbjct 7405 GCCTACATCTGCCAGAGCCAGTCGCTGAACGTGCACATCGCCGAGCCGACGATCAGCAAG 7464 Query 98160 ATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCT 98218 | || ||||| ||||| ||||| ||||| |||||||||||||| ||||||||||| || Sbjct 7465 CTCACGTCGATGCACTTCTACGCGTGGAAGAAGGGCCTCAAGACCGGCATGTACTACCT 7523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740899159002520