Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq1466 95.1 1e-14 >seq1466 Length=11765 Score = 95.1 bits (104), Expect = 1e-14 Identities = 192/285 (67%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 15365 TCGGGCTTTACCGGCGAAAGGATCCAAAGCACCATATTTATGGGACCGACGTACTATCAC 15424 |||||| | || ||||| ||||| || ||| || ||||| |||| ||||| || Sbjct 1410 TCGGGCATCACGGGCGAGCCGATCCTGTGCTACATCTTCATGGGCCCGATCTACTACCAG 1469 Query 15425 CGACTCAAACACATGGTAAAGGACAAGATGCACGCGCGATCGCACGGACAGGTGACGACG 15484 ||||| |||||||| | |||||||||||||||||| ||| ||| | | || | Sbjct 1470 AAGCTCAAGCACATGGTCATGGACAAGATGCACGCGCGTGCGCGCGGCCCCCGGGCGGTG 1529 Query 15485 CTCCATCGCCAGCCCAACTGCGGTCGATCGCAAGGCGGTGGCCTCCGCTTTGGAGAGATG 15544 ||| || ||||| | | || || |||| | ||| ||||| || | || |||||| Sbjct 1530 CTCACGCGGCAGCCGACCGAGGGCCGCTCGCGCGACGGCGGCCTGCGTCTCGGCGAGATG 1589 Query 15545 GAAAAGGACTGCATTCTGGTGCACGGCGCCACCCAATTCCTCAACGAGCGCATGTTTCTC 15604 || |||||| | | | ||||||| | | | |||| |||||| || | || Sbjct 1590 GAGCGCGACTGCCTCATCGGCTACGGCGCGAGCATGCTGCTCATGGAGCGCCTGATGATC 1649 Query 15605 AACAGTGACCCGTTCCAGATTGACGTGTGCAAAGACTGCGGCATG 15649 |||||| ||||| | ||||||||| | | ||| ||||| Sbjct 1650 TCGAGTGACGCGTTCTCGGCGGACGTGTGCCAGGGCTGTCGCATG 1694 Score = 82.4 bits (90), Expect = 9e-11 Identities = 126/177 (71%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 15020 GTAAAGGTTGTCATTGGCCAGATGCGCACGCCCGAGATTGGCGACAAGTTTTGCTCT-GG 15078 || ||||| |||| |||||| |||| ||||||||| ||||||||||| || | | Sbjct 1065 GTCAAGGTGCTCATCCGCCAGACGCGCCGGCCCGAGATCGGCGACAAGTTCAGCAGTCGC 1124 Query 15079 TATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTACCGC 15138 | ||| || |||||| |||||||| || | |||||| |||||||| || | || Sbjct 1125 CACGGC-CAGAAGGGCGTGTGCGGCACCATCCGCAACCAGGAGGACATGCCGTTCAACGA 1183 Query 15139 GTCAGGCATGACGCCCGACATTATCATCAACCCCAACTGCATCCCGTCCCGCATGAC 15195 ||| || || ||| | ||||| ||||| || || ||||| ||||||||| Sbjct 1184 CCAGGGCGTGTGCCCGGACCTCATCATGAACCCGCACGGCTTCCCGAGCCGCATGAC 1240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611259962255200