Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq18 136 4e-27 >seq18 Length=85926 Score = 136 bits (150), Expect = 4e-27 Identities = 411/627 (66%), Gaps = 6/627 (1%) Strand=Plus/Minus Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 ||||| | |||||| |||||| || | || || || || || || | ||||| Sbjct 69273 GTACAGCAGGCACGCGAAGTCGCAGTGGAGGCCCTCATCACGCGAGATGAGTTCATTCGA 69214 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA-C 93200 ||| | | || || | || || || |||||||||||||| || | |||| || | | Sbjct 69213 GAAGCTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAAAAGATCG-AGCAGAAGGATC 69155 Query 93201 CAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGG 93260 |||| || || ||||| || ||||| ||||| || ||||| || || ||||| ||| Sbjct 69154 CAGAGAAGAAGATACCCTCGACGGCCGCAAAGGCGACAATGCGCTCCGCAAACGCCGCGC 69095 Query 93261 AATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTT 93320 | | | | ||| || | |||||| | ||| || |||| | |||||| | || | Sbjct 69094 GACGAGAGTCGCACCACTTCAGAGCCCAGTGGGCCTTCTTCTGCACACAAGGAATGGTCT 69035 Query 93321 CGATAGCGTTAAATAGGT-AATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379 | || ||| | |||| ||| |||| | || | ||||| || || || | | Sbjct 69034 CAATCGCGCGGAGAAGGTGGTTCTTCTCCGTCTGGTCCTTG-ATGTACGTGTCAATGAGC 68976 Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439 || || |||| || || |||| ||||| || || || ||||| |||||||| || | Sbjct 68975 AGCGAGTACACCTCCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGT 68916 Query 93440 GCTTCCGTGATCTGCACTTC-TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498 || || | || |||||| || || || | || |||| ||||| ||||| || || Sbjct 68915 GCCTCAGGGACCTGCACCTCGCTGCTGAAGT-TCATGGCGAGGTTTTCGTTGACAATGCC 68857 Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG 93558 || || |||||||| || | | |||||| || |||| ||||| || | || Sbjct 68856 GTCACTGGCGGCAAAAAACGCGAGCACATGCTTGATGAAATAGCGCTCATTGTCCGTGAG 68797 Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618 || | ||| || || || | ||||| | || ||| | ||||| || || Sbjct 68796 GTTGTTCCAGTCCTTGAGGTCGTGCACCAGATCAATCTCCTCGGCCGTCCAGAAGCTCGC 68737 Query 93619 TTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678 || || || |||||||| | ||| | || | | ||||| ||||| | || || || Sbjct 68736 CTCGGCCTTCTTGTACATCTGCCACACCTCGTTCTCCTGAATCGGAAAGAGAACGAAGCG 68677 Query 93679 ATTAGGGTTATCTTTTAGTAACGGCTC 93705 || ||||| || | || |||||||| Sbjct 68676 GTTGGGGTTTTCCTGAAGGAACGGCTC 68650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556740538949480