Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq757 147 2e-30 seq5268 140 3e-28 >seq757 Length=19743 Score = 147 bits (162), Expect = 2e-30 Identities = 295/432 (68%), Gaps = 8/432 (2%) Strand=Plus/Minus Query 20144 CGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAGATGTGGGCA 20203 ||||| |||||| ||||| | | || ||||| | ||| ||| ||||| || Sbjct 19469 CGTGGGGTGCGCCCTAGCTGGACCTTGAGGGGCTCGACATGATCCAGGTAAATGTGAGCG 19410 Query 20204 TCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAA 20263 || || | |||||||| || || || | | || || ||||| || || | || Sbjct 19409 TCGCCAATGGTGTGAATGAAGTCACCCGCCCGCAGCCCTGTAACCTGCGCGATCAGCCGC 19350 Query 20264 GTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTC 20323 || ||||| | ||||| || ||||| || || || || | ||||||||| | || | | Sbjct 19349 GTCAAGAGCGCGTAGCTCGCGATGTTGAAGGGCACACCGAGACCCATGTCGGCTGAGCGC 19290 Query 20324 TGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAG 20383 ||||||| ||| || || ||||||||||| || || ||||| || || |||| ||||||| Sbjct 19289 TGATACATCTGGCAAGACAGCTCACCGTCCGCGACGTAAAACTGGCAGAACATGTGACAG 19230 Query 20384 GGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTA 20443 || || || |||||| | | || ||||||||||| || |||| || || | | Sbjct 19229 GGGGGCAGTGCCATCTCCTTGAGATCGGCCGGGTTCCATGCTGACATGATTATGCGACGG 19170 Query 20444 TCGTGCGGATTATTTTTTATTAAATCCACAAT--GTACGACAA-TTGGTCAAACCCCTGG 20500 |||| |||||| | || | | | | ||| || ||| ||||| | ||||| Sbjct 19169 TCGTTCGGATTCGTCTTCAGT---TTGAGAATCACCTCGGCAAGCTGGTCGACGCCCTGA 19113 Query 20501 CCTGTATAGTCAGCAT-CCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACC 20559 || || ||||| || | | ||| | |||| || || ||||| | ||||||||| || Sbjct 19112 CCCGTGTAGTCGGCGTGCATCGT-CGTGTACTTTGCGCCGAAGTGGCGCCACTGGAAGCC 19054 Query 20560 GTAAACAGGTCC 20571 ||| || ||||| Sbjct 19053 GTACACCGGTCC 19042 >seq5268 Length=2107 Score = 140 bits (154), Expect = 3e-28 Identities = 265/385 (69%), Gaps = 10/385 (3%) Strand=Plus/Plus Query 20192 TAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGA 20251 || ||||| || || || | |||||||| || || || | | || || ||||| || Sbjct 125 TAAATGTGAGCGTCGCCAATGGTGTGAATGAAGTCACCCGCCCGGAGTCCTGTAACCTGC 184 Query 20252 GCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATG 20311 || | || || ||||| | ||||| || ||||| || || || || | |||||| Sbjct 185 GCGATCAGCCGCGTCAAGAGTGCGTAGCTCGCGATGTTGAAGGGCACGCCGAGCCCCATG 244 Query 20312 TCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACAT 20371 || | || | |||||||| || || || ||||||||||| || || ||||| || || Sbjct 245 TCGGCTGAGCGCTGATACATTTGGCACGATAGCTCACCGTCCGCGACGTAAAACTGGCAG 304 Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 |||| ||| ||||| || || |||||| | | || ||||||||||| || |||| Sbjct 305 AACATGTGGCAGGGGGGCAGTGCCATCTCCTTAAGATCGGCCGGGTTCCATGCTGACATG 364 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTA--TTA--AATCCACAATGTACGACAATTG 20487 || || | | |||| |||||| | || | ||| |||| | || | | || Sbjct 365 ATTATGCGACGGTCGTTCGGATTCGTCTTCAGCTTATGAATCACCTCTGCA----AGCTG 420 Query 20488 GTCAAACCCCTGGCCTGTATAGTCAGCAT-CCGCGTCCACGTACGCCGCCCCAAAGTGCC 20546 ||| | |||||||| || ||||| || | | ||| | |||| || || ||||| | Sbjct 421 GTCGACGCCCTGGCCGGTGTAGTCGGCGTGCATCGT-CGTGTACTTTGCGCCGAAGTGGC 479 Query 20547 TCCACTGGAAACCGTAAACAGGTCC 20571 ||||||||||||||| || ||||| Sbjct 480 GCCACTGGAAACCGTACACCGGTCC 504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441277480026680