Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_009447.1 Length=52414 Score E Sequences producing significant alignments: (Bits) Value seq1830 84.2 7e-12 >seq1830 Length=9598 Score = 84.2 bits (92), Expect = 7e-12 Identities = 181/267 (68%), Gaps = 8/267 (3%) Strand=Plus/Plus Query 29331 ACGCCGCGTGACTCCATGCACATGTGGCGAGCATTGATCGTGACGTAAACCGCGCGCGGC 29390 |||||||| | ||||||||||||| || | ||| |||| || | ||||| Sbjct 4431 ACGCCGCGCATCACCATGCACATGTGCGTCGCTTCGATAACGACGGCCACGCCTTGCGGC 4490 Query 29391 TGAACGTGTTGGGCCAGCGCATCCGCGATCTGGTTCGTCAGGCGCTCTTGAACTTGCAGG 29450 |||| | | ||| | ||||||||| || |||| |||||||| || ||||| Sbjct 4491 TGAATGACACCCATGATCGCGTTCGCGATCTGCTTGGTCAATCGCTCTTGCACCTGCAGC 4550 Query 29451 CGCTTGGCGAAAATGTCTGCCAG--CCGCTTGAGCTTCGAAATACCGACGACTTTGCCGC 29508 ||| ||||||| || | || || |||||| | ||||| || |||||| Sbjct 4551 CGC--CGCGAAAAGACCTCCGAGATGCGAGCGAGCTTGCTGAGACCGAGCACCTTGCCGT 4608 Query 29509 TCGGGATATAGCCGATATGGGCCGTTCCCATGATCGCCGCCATATGGTGTTCGCAGTGCG 29568 ||||||| |||||||| || || | || |||| || | |||| || || || ||| ||| Sbjct 4609 TCGGGATGTAGCCGATGTGCACCTTGCCGATGAACGGCACCATGTGATGCTCACAGAGCG 4668 Query 29569 A--ATAGATCGGGATATCGCGAACGAT 29593 | | ||||| || ||||| ||||| Sbjct 4669 AGTACAGATC--AATGTCGCGGACGAT 4693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167568813794224