Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq1125 136 2e-27 seq1291 93.3 2e-14 >seq1125 Length=14513 Score = 136 bits (150), Expect = 2e-27 Identities = 383/587 (65%), Gaps = 17/587 (3%) Strand=Plus/Plus Query 65971 GCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACG 66030 |||| || |||||||||||||| || ||| || || ||| | ||| | || | Sbjct 9132 GCCGCGTCGTGGAGATCTACGGCCCGGAGAGCTCGGGCAAGACGACGCTCGCGCTGAGCA 9191 Query 66031 CGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTC 66090 | || | || ||| || || ||| | ||| | |||||||||||| ||| | Sbjct 9192 GCATCGCGCAGGCGCAGCAGCAGGGCGGCGTCTGCGCGTTCATCGACGCCGAGCATGCCA 9251 Query 66091 TCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGC 66150 ||||| | | |||||| | |||||| || || ||||| | ||| | |||| Sbjct 9252 TCGACGCGCACTACGCCAAGCAGCTCGGCGTCGACATCGACGAGCTCTACATCTCCCAGC 9311 Query 66151 CAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTT 66210 | ||| | ||||||||||| || ||||||| ||| ||||| ||| |||| || Sbjct 9312 CCGACTCGGGCGAGCAGGCGCTCGAGATCGCCGACACGCTCGTGCGGTCGGGCGCCGTCG 9371 Query 66211 CCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACA 66270 | | |||| || ||| ||||| || || |||||||| || ||||| ||||| || | Sbjct 9372 ACGTGGTCGTCGTCGACAGCGTGGCCGCGCTCGTGCCGCGCGCCGAGCTGGAAGGCGAGA 9431 Query 66271 TCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGA 66330 | || ||| ||| ||| ||||| || || || ||| ||||| |||||||||| | Sbjct 9432 TGGGCGACCAGCAGATCGCGCTGCAGGCGCGGCTCATGAGCCAGGCGCTGCGCAAGCTCA 9491 Query 66331 CCGGCACGAT-TGCCAG--CACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGA 66387 | ||| || | || || || | || ||||| | | |||| ||| | ||| ||| Sbjct 9492 CGGGCTCGCTGAGCAAGTCCAACTGCATGCTCA---TCTTTCTGAACCAGATCCGCCAGA 9548 Query 66388 AGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCT 66447 | | |||| | | || |||| || ||| ||| | || || | ||| ||||||| Sbjct 9549 AAGTGGGCATCAT---CTTCGGCTCGCCCGAGGTCACGTCGGGCGGCACGGCGCTGCGCT 9605 Query 66448 TCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGG 66507 |||||| || || || | || || ||| ||||||||| ||| Sbjct 9606 ACTACGCGTCCGTCCGGCTCGA------CA--TTCGNNNNNNNNNNGGAAGGCGACAAGG 9657 Query 66508 CTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCG 66554 ||||||||| | ||| ||||| | |||||||||||| ||| Sbjct 9658 TCGTCGGCAACGAGATCGTCGTCAAGGTGGCCAAGAACAAGCTCGCG 9704 >seq1291 Length=13138 Score = 93.3 bits (102), Expect = 2e-14 Identities = 230/344 (67%), Gaps = 15/344 (4%) Strand=Plus/Plus Query 66217 TCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGG 66276 |||| || ||| ||||| || || |||||||| || ||| | ||||| || || || | Sbjct 8042 TCGTCGTCGACAGCGTGGCCGCGCTTGTGCCGCGCGCCGAGTTGGAAGGCGAGATGGGCG 8101 Query 66277 ACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCA 66336 || ||| ||| ||||| || || || ||| ||||| |||||||||| || ||| Sbjct 8102 ACCAGCAGATCGCGCTGCAGGCGCGGCTCATGAGCCAGGCGCTGCGCAAGCTCACGGGCT 8161 Query 66337 CGATTGCCAGCA---CCAAC---ACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGA 66390 | | || |||| ||||| | ||||| | | |||| ||| | ||| |||| Sbjct 8162 C-ACTG--AGCAAGTCCAACTGCATGCTCATCTTTC---TGAACCAGATCCGCCAGAAAG 8215 Query 66391 TCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCT 66450 |||||| | | || |||| || ||| ||| | || || | ||| ||||||| || Sbjct 8216 TCGGCATCAT---CTTCGGCTCGCCCGAGGTCACGTCGGGCGGCACGGCGCTGCGCTACT 8272 Query 66451 ACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTG 66510 |||| || || || | || | ||| | | || | || || ||||| ||| | Sbjct 8273 ACGCGTCCGTCCGGCTCGACATTCGCCGCAAGGCGGCGATCAAAGAGGGCGACAAGGTCG 8332 Query 66511 TCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCG 66554 |||||||| | ||| ||||| | |||||||||||| ||| Sbjct 8333 TCGGCAACGAGATCGTCGTCAAGGTGGCCAAGAACAAGCTCGCG 8376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242419344599084