Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq456 199 4e-46 seq683 170 2e-37 seq7289 123 2e-23 seq7513 118 1e-21 seq14351 102 8e-17 >seq456 Length=26154 Score = 199 bits (220), Expect = 4e-46 Identities = 1085/1700 (64%), Gaps = 70/1700 (4%) Strand=Plus/Minus Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGC----GGCCGGTTTTGTGCGCAGATAGTACATGC 145774 ||| || |||||||| |||| | || |||||| | ||| || |||||||||| Sbjct 7566 GTCCACCGTGAACTGGATCGCGTCGGCCTTCGGCCGGCT----GCGGAGGTAGTACATGC 7511 Query 145775 CGGTCTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACATGACCGAGTA---CG 145831 |||||||||| |||| ||||| ||| ||||| || |||| ||| | | || Sbjct 7510 CGGTCTTGAGGCCCTTCTTCCACGCGTAGAAGTGCAT---CGACGTGAGCTTGCTGATCG 7454 Query 145832 TGGGTTCGGCGACAAACAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCC-CGGTCG 145890 | || ||||||| || || || || |||||||| ||| | || ||| |||||| Sbjct 7453 TCGGCTCGGCGATGTGCACGTTCAGCGACTGGCTCTGGCAGATGTA-GGCGCCGCGGTCG 7395 Query 145891 GCGGCCATGTCTATCATGCACTTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTTG 145950 || |||||||| | || | ||| || || ||||| |||| || | |||||| Sbjct 7394 GCCGCCATGTCCAGCACGGCCTTCTGCTTGATCTCCCACACGGTCTTGTACTTCTCCTTG 7335 Query 145951 ACGTGCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTG 146010 || | ||| || || | ||||||||| || || | || || || | |||| Sbjct 7334 ACCGCGTCGGGGATCGCGCGCACGTTCTGCACCGAGCCGTGGTCATGCAGGATCTGGTTG 7275 Query 146011 CGCAATTCTGGAGTGTAAATGTTCAAGTCTACGAGGGCCTTGATGAGATACTGGTTGACC 146070 |||| || || || | ||| | || | ||| |||| ||||| |||| ||| || Sbjct 7274 CGCACCTCGGGCGTCCAGATGCCGAGCTCGATGAGCTCCTTCATGAGGTACTTGTTCACG 7215 Query 146071 ACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAAC 146130 | | ||||||||||||||| ||||| | |||| |||| | ||||||||||||| | Sbjct 7214 ATCGTAAACTCGCCGGCGAGCACGCGGCGGTTGTACATGTTGGTCGTGAACGGCTCGATC 7155 Query 146131 GACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAA 146190 ||||||||||| || || |||||||| |||| || || |||||| ||| | ||||| Sbjct 7154 GACTCGTTGTTGCCAAGAATCTGCGCGGTCGACGCCGTCGGCATGGGCGCGAGCAGCAGC 7095 Query 146191 GAGTTTCTCACGCCGT-GTCTTTGAATCTTTTCCCGTAGTTTGGACCAATTCCACAAATG 146249 ||||| | |||||||| | |||| | | || || | ||| | ||| | Sbjct 7094 GAGTTGCGCACGCCGTACTGCTTGACGC-TGGCCTTGAGCGCCGCCCAGTCCCAGAGGCC 7036 Query 146250 ATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCC---GCGGAACAGGGGGCT 146306 ||| || || | ||||||| || | |||| || | | ||| || Sbjct 7035 CGACGTCGGCGTGACGCCCCACATGTCGTACTGGAAGATGCCCTTGCTCACCGGGGAGC- 6977 Query 146307 ATTCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTTCCAGAGC 146366 ||| || |||| || |||| |||||| || || | || |||| || Sbjct 6976 --CCTCATAGCTGGCATACGGGCCGTGCTCCTTGGCGAGCTCCATGGACGCCTCCATCGC 6919 Query 146367 CGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTC-CTGGCCTCCTCGCTGTCGT 146425 ||||| | ||||| ||| | | ||||| |||| | |||||| ||||| ||| Sbjct 6918 ACCGAAGTACAGCGTCTCGAAGATGTTCTTGTTGA-GCTCGCGGGCCTCGTCGCTCTCGA 6860 Query 146426 AGGGGATATCGAGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAACGGGGC 146485 | | | | | || | || ||||||||||||||||| | |||| || | |||| Sbjct 6859 ACGCGTGGCCCATGAGAATGAACGCGTCGGCGAGACCCTGCACACCGATGCCGATCGGGC 6800 Query 146486 GGTGTTTCTTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCGATGATCT 146545 |||| | ||| ||| | | || ||| |||| |||| |||| ||||||||| || Sbjct 6799 GGTGGCGCAGGTTGCTGCGCTCGGCCTCCGGGATGGGGTAGTAGTTGATGTCGATGACCT 6740 Query 146546 TGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAGCAGGACATAGTCAAATGTTT 146605 |||| || || ||| || | || || | | ||| | ||||||| || | Sbjct 6739 TGTTCAGGTTGCGCGTCACGACCTTGGTGATGTCGTAGAGCTTCTTAAAGTCAAACGTCT 6680 Query 146606 TAGTTTTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAAGTTACATACGGCAGTCT 146665 | || | |||| || ||||| | ||||| || || | ||| || ||||| || Sbjct 6679 T-GTCGT--CGTTCACAAACTTGGACAGCGCGATGGACGCGAGGTTGCACACGGCGACCT 6623 Query 146666 CGTCCTTGTCG--CAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCC 146723 |||| || || |||| | | |||| ||| |||||||| | ||| |||| Sbjct 6622 CGTC--TGGCGACGTGTACTCGAGCACCTCGCAGCAAAGGTTGCTCGAGCGGATCGTGCC 6565 Query 146724 CAAAtttttttGGTTACTAAACTT---GTTGCAGGGGTCCTTGTAGAGCATGTACGGTCC 146780 | || | |||| | |||| |||||| | ||||||||| ||||||||||| Sbjct 6564 GAGGTTCTGCTGGT---TCGACTTGCGGTTGCACGAGTCCTTGTACAGCATGTACGGCGT 6508 Query 146781 CCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACAAATCT-CTGGCCTTTACTTGTC 146839 || || |||| | | ||||| ||| | || || | || ||| | | ||| Sbjct 6507 GCCCGTCTCGATCTGAGACTCGAGGAT--CGCGAACCAGAGCTGCTGCGCGCGGATCGTC 6450 Query 146840 TTTCGTAC-AGTTTATTCTTTTCGTATTTCTCGTACAATATTTCAAAACTAG-AACCGTA 146897 || || | | | ||| ||||| | | ||||| || |||| | || | Sbjct 6449 TTGCGCGCGCGGCCCTCCTTCTCGTACTGGTGGTACAGCGCCTC-GAACTCGTCGCCCCA 6391 Query 146898 C-TCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTATTCTCCT 146956 | |||| | || || || || || || ||||| || ||| || || ||| Sbjct 6390 CGTCGT-GTAAAGCCCCGGGGCCTCGTTCGGGCAGAAGAGGCTCCACTCGCCGTTGGCCT 6332 Query 146957 TCACGCGTTCCATAAACAAATCGGGAATCCA-AAGGCCCAGCATCAAGTCGCGAG--CCT 147013 ||||| | ||| || | ||| || ||||| | ||| || | || || |||| | Sbjct 6331 CGACGCGCTTCATGAAGAGATCCGGGATCCACATGGCGTAG-AACAGATCACGAGCACGA 6273 Query 147014 TGGCGTCCTCGGAGCCCATGTTGCGTC-TCAAGTTGAGGACATCGTAAATTTCCGGATGC 147072 ||| | ||| | || || | | || | | || ||||| ||| | || |||| ||| Sbjct 6272 TGGAG--CTC-GTTACCGTGGTTCTTCTTGAGGTCGAGGAACTCGAAGATGTCCGCGTGC 6216 Query 147073 CAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTT---ACCGCCCTGATCGACGTGG 147129 || ||||| | ||| |||| | ||| || ||||| |||||||| || |||| | Sbjct 6215 CACGGCTCGAGGTACATCGCGAACGAGCCCTTGCGCTTGCCGCCGCCCTGGTCCACGTAG 6156 Query 147130 CGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGCCGGA------TTTTGTG 147183 ||| || ||| ||||| || || | ||| | |||||| ||| || || ||| Sbjct 6155 CGCGCCGTGTCGTTGAACACGCGGAGCATCGGCACGAGTCCGTTCGACGAGCCGTTCGTG 6096 Query 147184 GTGCCGTTGTA----TTG--AGCGCTGACGCTTTGCACGCTCAGCCCGAGACCTCCGCCC 147237 || | |||| ||| |||| || | | |||||||||| |||| || ||| || Sbjct 6095 CCGCGGATGTACGAGTTGGTGGCGCGGATGTTGTGCACGCTCACACCGATGCCGCCGGCC 6036 Query 147238 AGATTCGAAATCAAAGCGGACTCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGTCTTCC 147297 || || || | ||| ||| | | || | ||||||||| ||||| ||| ||| Sbjct 6035 CACTTGGAGATGCAGGCGCACTGCTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCGTCC 5976 Query 147298 TTGATGCATTGCAGGAAACACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAGC 147357 || ||| ||||||| || || | | || || || |||||| || ||||||| Sbjct 5975 TTCATGGCCAGCAGGAAGCAAGACGAGAGCTGCGGGCGCGGCGTGCCAGCGTTAAACAGC 5916 Query 147358 GTGGGGCTGGCGTGCGTGAA 147377 || || | ||||||||||| Sbjct 5915 GTCGGCGTCGCGTGCGTGAA 5896 >seq683 Length=21216 Score = 170 bits (188), Expect = 2e-37 Identities = 332/489 (68%), Gaps = 6/489 (1%) Strand=Plus/Plus Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778 ||| || |||||||| |||| | || |||| |||| || |||||||||||||| Sbjct 18549 GTCCACCGTGAACTGGATCGCGTCGGCCTTCGGTCGGCTGCGGAGGTAGTACATGCCGGT 18608 Query 145779 CTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACATGACCGAGTA---CGTGGG 145835 |||||| |||| ||| | ||| ||||| || |||| ||| | | ||| || Sbjct 18609 CTTGAGGCCCTTCTTCCATGCGTAGAAGTGCAT---CGACGTGAGCTTGCTGATCGTTGG 18665 Query 145836 TTCGGCGACAAACAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGC 145895 ||||||| || || || || |||||||| ||| | | | | ||||||||||| Sbjct 18666 ATCGGCGATGTGCACGTTCAGCGACTGGCTCTGGCAGATGTAGGCACCGCGGTCGGCGGC 18725 Query 145896 CATGTCTATCATGCACTTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTTGACGTG 145955 |||||| | || | |||| || || ||||| |||| || | |||||||| Sbjct 18726 CATGTCCAGCACGGCCTTTTGCTTGATCTCCCACACGGTCTTGTACTTCTCCTTGACCGC 18785 Query 145956 CTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGCAA 146015 | ||| || | | |||||| || || || | || | || | |||||||| Sbjct 18786 GTCGGGGATCACACGCACGTTCTGAACCGAGCCGTGGTCATGTAGGATCTGGTTGCGCAC 18845 Query 146016 TTCTGGAGTGTAAATGTTCAAGTCTACGAGGGCCTTGATGAGATACTGGTTGACCACCTG 146075 || || || | || || || | ||| |||| ||||| |||| ||| || | | Sbjct 18846 CTCGGGCGTCCAGATTCCCAGCTCGATGAGCTCCTTCATGAGGTACTTGTTCACGATCGT 18905 Query 146076 AAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAACGACTC 146135 ||||||||||||||| ||||| | |||| |||| | ||||||||||| | |||||| Sbjct 18906 AAACTCGCCGGCGAGCACGCGGCGGTTGTACATGTTGGTCGTGAACGGCTCAATCGACTC 18965 Query 146136 GTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAAGAGTT 146195 |||||| || || |||||||| |||| || || ||||| ||| | ||||| ||||| Sbjct 18966 GTTGTTGCCAAGAATCTGCGCAGTCGATGCCGTTGGCATAGGCGCGAGCAGCAGCGAGTT 19025 Query 146196 TCTCACGCC 146204 | ||| || Sbjct 19026 GCGCACACC 19034 Score = 102 bits (112), Expect = 8e-17 Identities = 348/538 (65%), Gaps = 17/538 (3%) Strand=Plus/Plus Query 147045 GTTGAGGACATCGTAAATTTCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTT 147104 || ||||| ||| | || |||| ||||| || || | ||| |||| | ||| || Sbjct 19872 GTCGAGGAACTCGAAGATATCCGCGTGCCACGGTTCGAGGTACATCGCGAACGAGCCCTT 19931 Query 147105 TCGCTTACCGCC---CTGATCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGA 147161 |||||| ||||| ||| || |||| |||| || ||| || || || || | ||| | Sbjct 19932 TCGCTTGCCGCCACCCTGGTCCACGTAGCGCGCCGTGTCGTTAAACACGCGGAGCATCGG 19991 Query 147162 CACGAGGCCGCCGGAT------TTTGTGGTGCCGTTGTA----TTGA--GCGCTGACGCT 147209 ||| |||||| || || ||| || | | || ||| || | | | | Sbjct 19992 CACAAGGCCGTTCGACGAGCCGTTCGTGCCGCGGATATACGAGTTGGTGGCACGAATGTT 20051 Query 147210 TTGCACGCTCAGCCCGAGACCTCCGCCCAGATTCGAAATCAAAGCGGACTCGTGCAAGGT 147269 |||||||||| |||| || ||| || ||||| || | ||| ||| | || || Sbjct 20052 GTGCACGCTCACACCGATGCCGCCGGCCCACTTCGAGATGCATGCGCACTGCTTCAGCGT 20111 Query 147270 CTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTG 147329 | ||||||||| ||||| ||| ||||| ||| ||||||| || || ||| || Sbjct 20112 GTCGTAGATGCCCTCGATCGAGTCGTCCTTCATGGCAAGCAGGAAGCAAGACGACAGCTG 20171 Query 147330 GGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACGTGCCCAGACT 147389 ||||| ||||||||| ||||||||| || | ||||||||||| || | Sbjct 20172 CGGACGCGGCGTGCCCGCGTTAAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGA 20231 Query 147390 CATCAATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGAC 147449 ||| | | ||||| || | ||| || ||| | ||| ||| | | ||||| Sbjct 20232 CATGTACTCGTACGTCTCGAGCGCGGCGTCAATGTCGTGCTTGTGGATGCCGACAGCGAC 20291 Query 147450 GCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGACTTTTAATAGATATCC 147509 ||| | | ||| ||||| || || ||||| | | | || ||| | ||||| | Sbjct 20292 GCGGAGAATCATCTGCTGCGGGCGCTCCGCGACCTTGCCACCGACGCGCAGCAGATA-CG 20350 Query 147510 ATTGGTC-AGAGTTTTGAAACCAAAGTACTTGTAGTCGTAGTCCCTGTTGTGCTTGAT 147566 | | || || || ||||| |||||||| | |||||| | || | || ||| |||| Sbjct 20351 ACTTCTCGAGCGTCTTGAAGCCAAAGTAGTCGTAGTCAAAATCGCGGTCGTGGATGAT 20408 >seq7289 Length=1152 Score = 123 bits (136), Expect = 2e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030 || || ||| |||||| ||||||||||| ||||| ||||||||||||||| ||| ||| Sbjct 1152 TTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTC 1093 Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090 ||||||| | || | | |||||| | |||||| |||| || | ||| ||||||||| Sbjct 1092 TGCTTGACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTC 1033 Query 127091 AGAGTTTTTACAAAAATCTGCAT 127113 ||||| || || || |||||||| Sbjct 1032 AGAGTCTTGACGAAGATCTGCAT 1010 >seq7513 Length=1086 Score = 118 bits (130), Expect = 1e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030 || || ||| |||||| ||||||||||| ||||| ||||||||||||||| ||| ||| Sbjct 1 TTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTC 60 Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090 ||||||| | || | | | |||| | |||||| |||| || | ||| ||||||||| Sbjct 61 TGCTTGACATTGTCAATGCTATCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTC 120 Query 127091 AGAGTTTTTACAAAAATCTGCAT 127113 ||||| || || || |||||||| Sbjct 121 AGAGTCTTGACGAAGATCTGCAT 143 >seq14351 Length=379 Score = 102 bits (112), Expect = 8e-17 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || | ||||| || | ||| ||||| || || || ||||| || Sbjct 213 GCACCACCACGCAGGCGGAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCC 272 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | |||||| || || ||||| || || ||| |||||| ||||||||||| ||| Sbjct 273 GAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGA 332 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA 127037 || ||||||||||||||| ||| |||||||||| Sbjct 333 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGA 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475398109658480