Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq14351 95.1 8e-15 seq1170 82.4 5e-11 >seq14351 Length=379 Score = 95.1 bits (104), Expect = 8e-15 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | || ||||||||| ||||| |||||||| || |||| | || Sbjct 231 AGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCC 290 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||||||||| || ||||| || | || | ||||||||||| Sbjct 291 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCC 350 Query 34886 TTTATTTTTTGTTTGAC 34902 | || || || ||||| Sbjct 351 TGGATCTTCTGCTTGAC 367 >seq1170 Length=14133 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||| ||||||||| ||||| |||||||| || |||| |||| Sbjct 11114 AGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCC 11055 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || ||||| |||||||||||||| || ||||| || Sbjct 11054 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATC 11017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325624221004463