Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq408 82.4 8e-11 >seq408 Length=27789 Score = 82.4 bits (90), Expect = 8e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 22059 TGTATTGCGGATTCACGGGGCAACGTATCGAGAGCG-AGATCTTCATAGGACCCACATAT 22117 ||||| | ||| |||||| | ||| | | |||| |||||||||| || || || | Sbjct 1406 TGTATAGTGGACACACGGGCCGTCGTTTA-ACAGCGCAGATCTTCATCGGCCCAACGTTC 1348 Query 22118 TACCACAGACTCAAACATATGGTCAAGGACAAGATGCACGCCCGATCCCACGGCCAGGTG 22177 ||||| | | || ||||||||| | |||||||| ||| | || || | ||| | ||| Sbjct 1347 TACCAGCGCTTGAAGCATATGGTCGACGACAAGATCCACTCGCGCTCGCGCGGTCCTGTG 1288 Query 22178 ACGACGTTGCACCGGCAGCCGAACTGTGGGCGTGCTCAGGGCGGCGGGCTGCGGTTCGGA 22237 |||| |||| || ||||| | || ||||||| | || || ||||| | ||| Sbjct 1287 ACGATGTTGACACGCCAGCCCATGGAAGGTCGTGCTCGAGAAGGTGGTCTGCGTATGGGA 1228 Query 22238 GAGATGGAG 22246 ||||||||| Sbjct 1227 GAGATGGAG 1219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521432965708360